MRIQC: individual T1w report

Summary

  • BIDS filename: sub-HC05_ses-pre_run-2_T1w.
  • Date and time: 2020-07-21, 21:57.
  • MRIQC version: 0.15.2.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.6018761149370911
cnr1.8979089875902941
efc0.7049359037052941
fber51.67475128173828
fwhmavg3.45389994853288
fwhmx3.423337448988297
fwhmy3.5195249475549915
fwhmz3.418837449055352
icvscsf0.23012895483713433
icvsgm0.4113687933222865
icvswm0.35850225184057916
inumed1.359537124633789
inurange0.6781414270401
qi10.0
qi20.0038252023547714733
rpvecsf20.04579707899939
rpvegm11.27430801562291
rpvewm14.52821330227188
sizex224
sizey320
sizez320
snrcsf1.6478022478913348
snrgm8.29113312985407
snrtotal8.635064198394154
snrwm15.966257217437056
snrdcsf53.85668382917908
snrdgm90.51020213804063
snrdtotal87.05966271525135
snrdwm116.81210217853435
spacingx0.800000011920929
spacingy0.800000011920929
spacingz0.800000011920929
summarybgk5261.699537901066
summarybgmad5.60864600546459
summarybgmean113.1737060546875
summarybgmedian112.66686248779297
summarybgn7627106.0
summarybgp05103.39807319641113
summarybgp95122.59101867675781
summarybgstdv37.6672248840332
summarycsfk17.033608822817033
summarycsfmad108.7854400831292
summarycsfmean523.2035522460938
summarycsfmedian461.0690002441406
summarycsfn204333.0
summarycsfp05326.0892822265625
summarycsfp95899.507702636718
summarycsfstdv279.8077697753906
summarygmk0.5409950180916843
summarygmmad79.1885498910066
summarygmmean791.2446899414062
summarygmmedian774.861083984375
summarygmn103766.0
summarygmp05663.7705688476562
summarygmp95974.8612976074219
summarygmstdv93.45614624023438
summarywmk1.5577036074435213
summarywmmad56.33680301347742
summarywmmean1003.5531616210938
summarywmmedian1000.0325927734375
summarywmn556178.0
summarywmp05907.8940277099609
summarywmp951111.3707946777345
summarywmstdv62.634071350097656
tpmoverlapcsf0.11166337877511978
tpmoverlapgm0.36165255308151245
tpmoverlapwm0.4534551799297333
wm2max0.35912762572166984
AcquisitionMatrixPE320
AcquisitionNumber1
AcquisitionTime13:12:22.002500
BaseResolution320
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20200427
DeviceSerialNumber167017
DwellTime6.6e-06
EchoTime0.00314
FlipAngle9
ImageOrientationPatientDICOM[0.0408082, 0.989846, 0.136157, -0.0284236, 0.137365, -0.990113]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM', 'FM', 'FIL']
ImagingFrequency123.25
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressUniversity_Street_3801_Montreal_District_CA_H3A_2B4
InstitutionNameMc_Connell_Brain_Imaging_Centre
InstitutionalDepartmentNameDepartment
InversionTime0.9
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
ParallelReductionFactorInPlane2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps319
PhaseResolution1
PixelBandwidth235
ProcedureStepDescriptionFunctional_Dr.Bernhardt
ProtocolNamemprage-0.8iso
PulseSequenceDetails%SiemensSeq%_tfl
ReceiveCoilActiveElementsHC1-7
ReceiveCoilNameHeadNeck_64
ReconMatrixPE320
RefLinesPE32
RepetitionTime2.3
SAR0.0571934
ScanOptionsIR
ScanningSequenceGR_IR
SequenceName_tfl3d1_16ns
SequenceVariantSK_SP_MP
SeriesDescriptionmprage-0.8iso
SeriesNumber7
ShimSetting[311, -11603, -6442, 335, 30, -307, 82, 0]
SliceThickness0.8
SoftwareVersionssyngo_MR_E11
StationNameMRC35056
TxRefAmp263.904
md5sume53ce6315d2c2a77845c06de079d7ef7
softwaremriqc
version0.15.2
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.