MRIQC: individual T1w report

Summary

  • BIDS filename: sub-HC07_ses-pre_run-1_T1w.
  • Date and time: 2020-07-22, 16:29.
  • MRIQC version: 0.15.2.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.8054796186423361
cnr1.5490193693273082
efc0.6824386855239742
fber37.96076965332031
fwhmavg3.414545782452636
fwhmx3.372562449744903
fwhmy3.455087448515185
fwhmz3.4159874490978206
icvscsf0.2642486561390754
icvsgm0.38998916978831333
icvswm0.34576217407261123
inumed1.3597689867019653
inurange0.6452478170394897
qi10.0
qi20.003963932540729685
rpvecsf17.902529692873554
rpvegm11.659791499897034
rpvewm14.911493723254273
sizex224
sizey320
sizez320
snrcsf1.5449557893439099
snrgm8.2376689632264
snrtotal7.438340716950614
snrwm12.532397398281534
snrdcsf45.5866745740533
snrdgm79.85022412069446
snrdtotal74.90524182883146
snrdwm99.27882679174662
spacingx0.800000011920929
spacingy0.800000011920929
spacingz0.800000011920929
summarybgk34.174761572717564
summarybgmad6.599204183252161
summarybgmean132.54299926757812
summarybgmedian132.3689727783203
summarybgn7470495.0
summarybgp05121.6205551147461
summarybgp95144.2158966064453
summarybgstdv7.812855243682861
summarycsfk14.816977864074989
summarycsfmad114.052279494975
summarycsfmean529.450927734375
summarycsfmedian459.1956481933594
summarycsfn264177.0
summarycsfp05320.76771240234376
summarycsfp951048.9427490234375
summarycsfstdv297.2219543457031
summarygmk0.07677427240563617
summarygmmad95.66245584682045
summarygmmean818.0037231445312
summarygmmedian804.3331909179688
summarygmn69152.0
summarygmp05679.1837860107422
summarygmp95995.8285705566407
summarygmstdv97.64016723632812
summarywmk8.160836569111378
summarywmmad61.97375003480124
summarywmmean1013.4625854492188
summarywmmedian1000.0379638671875
summarywmn502922.0
summarywmp05914.8961212158202
summarywmp951152.6250854492187
summarywmstdv79.796142578125
tpmoverlapcsf0.097964808344841
tpmoverlapgm0.32834574580192566
tpmoverlapwm0.4330342710018158
wm2max0.3001133085153025
AcquisitionMatrixPE320
AcquisitionNumber1
AcquisitionTime09:56:0.575000
BaseResolution320
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20200427
DeviceSerialNumber167017
DwellTime6.6e-06
EchoTime0.00314
FlipAngle9
ImageOrientationPatientDICOM[-0.0116663, 0.982414, 0.186351, 0.00137927, 0.18638, -0.982477]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM', 'FM', 'FIL']
ImagingFrequency123.25
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressUniversity_Street_3801_Montreal_District_CA_H3A_2B4
InstitutionNameMc_Connell_Brain_Imaging_Centre
InstitutionalDepartmentNameDepartment
InversionTime0.9
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
ParallelReductionFactorInPlane2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps319
PhaseResolution1
PixelBandwidth235
ProcedureStepDescriptionFunctional_Dr.Bernhardt
ProtocolNamemprage-0.8iso
PulseSequenceDetails%SiemensSeq%_tfl
ReceiveCoilActiveElementsHC1-7
ReceiveCoilNameHeadNeck_64
ReconMatrixPE320
RefLinesPE32
RepetitionTime2.3
SAR0.049571
ScanOptionsIR
ScanningSequenceGR_IR
SequenceName_tfl3d1_16ns
SequenceVariantSK_SP_MP
SeriesDescriptionmprage-0.8iso
SeriesNumber20
ShimSetting[302, -11610, -6447, 400, 7, -327, 197, 55]
SliceThickness0.8
SoftwareVersionssyngo_MR_E11
StationNameMRC35056
TxRefAmp240.988
md5sumc308bfddeb4d73aa8411fecd1326a494
softwaremriqc
version0.15.2
Rate Image
Download

For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.