MRIQC: individual T1w report

Summary

  • BIDS filename: sub-HC11_ses-pre_run-1_T1w.
  • Date and time: 2020-07-22, 22:06.
  • MRIQC version: 0.15.2.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.49608766648882874
cnr2.28079398178646
efc0.6747987864203103
fber27.991165161132812
fwhmavg3.646870778990724
fwhmx3.712774944675342
fwhmy3.728124944446609
fwhmz3.4997124478502206
icvscsf0.25044583616645105
icvsgm0.38701411383060635
icvswm0.36254005000294254
inumed1.497428059577942
inurange0.5054392337799074
qi10.0
qi20.0036907114928417663
rpvecsf22.591071635703543
rpvegm14.326715238869573
rpvewm17.844481981188295
sizex224
sizey320
sizez320
snrcsf2.9170538293174646
snrgm10.473323171569165
snrtotal10.16336998931461
snrwm17.099732967057204
snrdcsf39.95047543231345
snrdgm72.40165421742641
snrdtotal69.12271714019623
snrdwm95.01602177084881
spacingx0.800000011920929
spacingy0.800000011920929
spacingz0.800000011920929
summarybgk7663.988744606468
summarybgmad6.8951092891184524
summarybgmean142.34921264648438
summarybgmedian141.59938049316406
summarybgn8489333.0
summarybgp05130.41738891601562
summarybgp95153.8863525390625
summarybgstdv46.64973449707031
summarycsfk51.16636158159158
summarycsfmad88.97846172956318
summarycsfmean435.4510192871094
summarycsfmedian420.46649169921875
summarycsfn175598.0
summarycsfp05295.5270004272461
summarycsfp95590.4909851074218
summarycsfstdv144.14039611816406
summarygmk0.8769491968532934
summarygmmad67.59965717144136
summarygmmean766.9761352539062
summarygmmedian762.0051879882812
summarygmn49854.0
summarygmp05657.0641693115234
summarygmp95893.9450225830078
summarygmstdv72.75604248046875
summarywmk2.8475079664800145
summarywmmad50.473809828712014
summarywmmean1004.1309204101562
summarywmmedian1000.0144653320312
summarywmn460799.0
summarywmp05917.3027770996093
summarywmp951103.829260253906
summarywmstdv58.48122787475586
tpmoverlapcsf0.1248256042599678
tpmoverlapgm0.36977818608283997
tpmoverlapwm0.467583030462265
wm2max0.3468953077625743
AcquisitionMatrixPE320
AcquisitionNumber1
AcquisitionTime16:28:37.595000
BaseResolution320
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20200427
DeviceSerialNumber167017
DwellTime6.6e-06
EchoTime0.00314
FlipAngle9
ImageOrientationPatientDICOM[0.0151269, 0.998694, -0.0487998, 0.0445366, -0.0494299, -0.997784]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM', 'FM', 'FIL']
ImagingFrequency123.25
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressUniversity_Street_3801_Montreal_District_CA_H3A_2B4
InstitutionNameMc_Connell_Brain_Imaging_Centre
InstitutionalDepartmentNameDepartment
InversionTime0.9
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
ParallelReductionFactorInPlane2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps319
PhaseResolution1
PixelBandwidth235
ProcedureStepDescriptionFunctional_Dr.Bernhardt
ProtocolNamemprage-0.8iso
PulseSequenceDetails%SiemensSeq%_tfl
ReceiveCoilActiveElementsHC1-7
ReceiveCoilNameHeadNeck_64
ReconMatrixPE320
RefLinesPE32
RepetitionTime2.3
SAR0.0434221
ScanOptionsIR
ScanningSequenceGR_IR
SequenceName_tfl3d1_16ns
SequenceVariantSK_SP_MP
SeriesDescriptionmprage-0.8iso
SeriesNumber20
ShimSetting[306, -11616, -6453, 548, -17, -346, -38, 7]
SliceThickness0.8
SoftwareVersionssyngo_MR_E11
StationNameMRC35056
TxRefAmp217.635
md5sumd6595e7cc3a3b87cc127b8a8900c97a9
softwaremriqc
version0.15.2
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.