MRIQC: individual T1w report

Summary

  • BIDS filename: sub-HC11_ses-pre_run-2_T1w.
  • Date and time: 2020-07-22, 21:48.
  • MRIQC version: 0.15.2.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.45483924936281156
cnr2.474371557423594
efc0.6676572096070841
fber27.656055450439453
fwhmavg3.732279111051374
fwhmx3.809424943235145
fwhmy3.906812441783958
fwhmz3.4805999481350187
icvscsf0.2362844648006046
icvsgm0.3934847749827795
icvswm0.37023076021661594
inumed1.4614958763122559
inurange0.4841326951980589
qi10.0
qi20.0036296261926590584
rpvecsf24.704692153301284
rpvegm14.712086816035407
rpvewm18.266012197174295
sizex224
sizey320
sizez320
snrcsf4.610542019199519
snrgm11.148122512373027
snrtotal11.507083837780657
snrwm18.762586981769424
snrdcsf38.989009987813375
snrdgm72.47409661477045
snrdtotal68.95528595456304
snrdwm95.40275126110531
spacingx0.800000011920929
spacingy0.800000011920929
spacingz0.800000011920929
summarybgk7694.052208006627
summarybgmad6.867170236691474
summarybgmean142.54759216308594
summarybgmedian141.9730682373047
summarybgn8619926.0
summarybgp05130.70921325683594
summarybgp95153.99784469604492
summarybgstdv44.16209030151367
summarycsfk34.02411571757052
summarycsfmad76.59634877093144
summarycsfmean416.18414306640625
summarycsfmedian408.68463134765625
summarycsfn149099.0
summarycsfp05298.49810791015625
summarycsfp95558.5395141601563
summarycsfstdv88.64104461669922
summarygmk0.8614822645507809
summarygmmad62.79975058720109
summarygmmean764.9072265625
summarygmmedian759.6768798828125
summarygmn53683.0
summarygmp05662.9411193847657
summarygmp95884.8664306640624
summarygmstdv68.14329528808594
summarywmk2.4091051600183055
summarywmmad46.51596592417779
summarywmmean1002.5980224609375
summarywmmedian1000.01611328125
summarywmn458856.0
summarywmp05921.4429931640625
summarywmp951091.9736633300781
summarywmstdv53.29835510253906
tpmoverlapcsf0.1330408900976181
tpmoverlapgm0.3760644197463989
tpmoverlapwm0.46905457973480225
wm2max0.33969163123324825
AcquisitionMatrixPE320
AcquisitionNumber1
AcquisitionTime15:36:46.495000
BaseResolution320
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20200427
DeviceSerialNumber167017
DwellTime6.6e-06
EchoTime0.00314
FlipAngle9
ImageOrientationPatientDICOM[0.0151269, 0.998694, -0.0487998, 0.0445366, -0.0494299, -0.997784]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM', 'FM', 'FIL']
ImagingFrequency123.25
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressUniversity_Street_3801_Montreal_District_CA_H3A_2B4
InstitutionNameMc_Connell_Brain_Imaging_Centre
InstitutionalDepartmentNameDepartment
InversionTime0.9
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
ParallelReductionFactorInPlane2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps319
PhaseResolution1
PixelBandwidth235
ProcedureStepDescriptionFunctional_Dr.Bernhardt
ProtocolNamemprage-0.8iso
PulseSequenceDetails%SiemensSeq%_tfl
ReceiveCoilActiveElementsHC1-7
ReceiveCoilNameHeadNeck_64
ReconMatrixPE320
RefLinesPE32
RepetitionTime2.3
SAR0.0434221
ScanOptionsIR
ScanningSequenceGR_IR
SequenceName_tfl3d1_16ns
SequenceVariantSK_SP_MP
SeriesDescriptionmprage-0.8iso
SeriesNumber7
ShimSetting[306, -11616, -6453, 548, -17, -346, -38, 7]
SliceThickness0.8
SoftwareVersionssyngo_MR_E11
StationNameMRC35056
TxRefAmp217.635
md5sum7c3a16a798d7ffff9e7f6d06b1ba9ef9
softwaremriqc
version0.15.2
Rate Image
Download

For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.