MRIQC: individual T1w report

Summary

  • BIDS filename: sub-HC12_ses-pre_run-1_T1w.
  • Date and time: 2020-07-22, 23:27.
  • MRIQC version: 0.15.2.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.5415927799022618
cnr2.0673184598648975
efc0.6715802163472282
fber26.519317626953125
fwhmavg3.5275374474355963
fwhmx3.5500499471001334
fwhmy3.552237447067537
fwhmz3.480324948139117
icvscsf0.19550755234308928
icvsgm0.4241576612361308
icvswm0.3803347864207799
inumed1.485360860824585
inurange0.5471791982650756
qi10.0
qi20.0037214345604761005
rpvecsf27.133143842008035
rpvegm13.336066022846902
rpvewm16.910467863437987
sizex224
sizey320
sizez320
snrcsf1.4450477992804103
snrgm9.753662625994593
snrtotal8.099695112974091
snrwm13.100374913647268
snrdcsf38.08979295290455
snrdgm66.81255715059753
snrdtotal63.847851148091706
snrdwm86.64120334077302
spacingx0.800000011920929
spacingy0.800000011920929
spacingz0.800000011920929
summarybgk18445.08420430377
summarybgmad7.561721506397434
summarybgmean152.55096435546875
summarybgmedian152.2859649658203
summarybgn7793570.0
summarybgp05139.78560562133788
summarybgp95165.78863525390625
summarybgstdv13.333240509033203
summarycsfk13.23089899879858
summarycsfmad96.87277107341423
summarycsfmean514.5823364257812
summarycsfmedian439.640380859375
summarycsfn114551.0
summarycsfp05311.7364196777344
summarycsfp951204.489501953125
summarycsfstdv304.2380065917969
summarygmk0.9579403885484181
summarygmmad70.29927094003742
summarygmmean780.6494140625
summarygmmedian771.16455078125
summarygmn85464.0
summarygmp05667.8572479248047
summarygmp95928.1079986572264
summarygmstdv79.06363677978516
summarywmk15.033098226819863
summarywmmad53.65311563590048
summarywmmean1010.6815795898438
summarywmmedian1000.0309448242188
summarywmn478736.0
summarywmp05920.7184143066406
summarywmp951126.3740844726562
summarywmstdv76.33597564697266
tpmoverlapcsf0.12402532249689102
tpmoverlapgm0.40362653136253357
tpmoverlapwm0.4813549220561981
wm2max0.3126993460819476
AcquisitionMatrixPE320
AcquisitionNumber1
AcquisitionTime10:27:7.152500
BaseResolution320
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20200427
DeviceSerialNumber167017
DwellTime6.6e-06
EchoTime0.00314
FlipAngle9
ImageOrientationPatientDICOM[0.0164674, 0.99643, 0.0828034, 0.0121392, 0.0826093, -0.996508]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM', 'FM', 'FIL']
ImagingFrequency123.25
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressUniversity_Street_3801_Montreal_District_CA_H3A_2B4
InstitutionNameMc_Connell_Brain_Imaging_Centre
InstitutionalDepartmentNameDepartment
InversionTime0.9
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
ParallelReductionFactorInPlane2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps319
PhaseResolution1
PixelBandwidth235
ProcedureStepDescriptionFunctional_Dr.Bernhardt
ProtocolNamemprage-0.8iso
PulseSequenceDetails%SiemensSeq%_tfl
ReceiveCoilActiveElementsHC1-7
ReceiveCoilNameHeadNeck_64
ReconMatrixPE320
RefLinesPE32
RepetitionTime2.3
SAR0.0449621
ScanOptionsIR
ScanningSequenceGR_IR
SequenceName_tfl3d1_16ns
SequenceVariantSK_SP_MP
SeriesDescriptionmprage-0.8iso
SeriesNumber19
ShimSetting[318, -11626, -6437, 476, 21, -313, 61, 21]
SliceThickness0.8
SoftwareVersionssyngo_MR_E11
StationNameMRC35056
TxRefAmp217.157
md5sumc38d82d6fcafe90b317374bf3c0a5a3f
softwaremriqc
version0.15.2
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.