MRIQC: individual T1w report

Summary

  • BIDS filename: sub-HC12_ses-pre_run-2_T1w.
  • Date and time: 2020-07-22, 23:08.
  • MRIQC version: 0.15.2.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.5343579058159689
cnr2.0955938582128364
efc0.6655767200599858
fber26.416698455810547
fwhmavg3.743820777546057
fwhmx3.8196374430829665
fwhmy3.848299942655862
fwhmz3.5635249468993404
icvscsf0.18068790866595222
icvsgm0.42659450265745275
icvswm0.392717588676595
inumed1.479477047920227
inurange0.5564316511154175
qi10.0
qi20.0041337876112726305
rpvecsf30.011066044777593
rpvegm14.02413006084218
rpvewm17.529866746880618
sizex224
sizey320
sizez320
snrcsf3.1507482005585294
snrgm9.873973036940772
snrtotal9.004400445172699
snrwm13.988480098018796
snrdcsf36.86088311262521
snrdgm67.70828159087951
snrdtotal64.04440330184303
snrdwm87.5640452020244
spacingx0.800000011920929
spacingy0.800000011920929
spacingz0.800000011920929
summarybgk9580.722409254058
summarybgmad7.481965126372081
summarybgmean151.78765869140625
summarybgmedian151.4344940185547
summarybgn8022878.0
summarybgp05139.03945693969726
summarybgp95164.7052459716797
summarybgstdv21.5794734954834
summarycsfk66.6133856140439
summarycsfmad83.68771010847422
summarycsfmean440.1343688964844
summarycsfmedian420.9685974121094
summarycsfn80672.0
summarycsfp05310.18871612548827
summarycsfp95617.5827178955078
summarycsfstdv133.60826110839844
summarygmk0.9069165528834162
summarygmmad69.24224722700251
summarygmmean783.2075805664062
summarygmmedian773.2603759765625
summarygmn82055.0
summarygmp05672.1211242675781
summarygmp95930.6765991210939
summarygmstdv78.31251525878906
summarywmk16.450378163934335
summarywmmad51.92989822580513
summarywmmean1007.9401245117188
summarywmmedian1000.0225219726562
summarywmn475768.0
summarywmp05919.8453948974609
summarywmp951111.365362548828
summarywmstdv71.48892974853516
tpmoverlapcsf0.14231306314468384
tpmoverlapgm0.4203379452228546
tpmoverlapwm0.4851003885269165
wm2max0.3112312957235132
AcquisitionMatrixPE320
AcquisitionNumber1
AcquisitionTime09:38:35.820000
BaseResolution320
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20200427
DeviceSerialNumber167017
DwellTime6.6e-06
EchoTime0.00314
FlipAngle9
ImageOrientationPatientDICOM[0.0164674, 0.99643, 0.0828034, 0.0121392, 0.0826093, -0.996508]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM', 'FM', 'FIL']
ImagingFrequency123.25
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressUniversity_Street_3801_Montreal_District_CA_H3A_2B4
InstitutionNameMc_Connell_Brain_Imaging_Centre
InstitutionalDepartmentNameDepartment
InversionTime0.9
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
ParallelReductionFactorInPlane2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps319
PhaseResolution1
PixelBandwidth235
ProcedureStepDescriptionFunctional_Dr.Bernhardt
ProtocolNamemprage-0.8iso
PulseSequenceDetails%SiemensSeq%_tfl
ReceiveCoilActiveElementsHC1-7
ReceiveCoilNameHeadNeck_64
ReconMatrixPE320
RefLinesPE32
RepetitionTime2.3
SAR0.0449621
ScanOptionsIR
ScanningSequenceGR_IR
SequenceName_tfl3d1_16ns
SequenceVariantSK_SP_MP
SeriesDescriptionmprage-0.8iso
SeriesNumber7
ShimSetting[318, -11626, -6437, 476, 21, -313, 61, 21]
SliceThickness0.8
SoftwareVersionssyngo_MR_E11
StationNameMRC35056
TxRefAmp217.157
md5sumf308f240d65d5d0fc40c44bdb631e817
softwaremriqc
version0.15.2
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.