MRIQC: individual T1w report

Summary

  • BIDS filename: sub-HC13_ses-pre_run-1_T1w.
  • Date and time: 2020-07-23, 00:51.
  • MRIQC version: 0.15.2.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.9085567692909745
cnr1.452866657911126
efc0.6956419403385076
fber27.918588638305664
fwhmavg3.3882499495111413
fwhmx3.4346249488201
fwhmy3.4118124491600326
fwhmz3.3183124505532917
icvscsf0.2236436926951768
icvsgm0.43769867007861074
icvswm0.33865763722621245
inumed1.3938570022583008
inurange0.7014742136001586
qi10.0
qi20.003194183680976152
rpvecsf21.8145302271078
rpvegm11.520523371300632
rpvewm16.30733166982275
sizex224
sizey320
sizez320
snrcsf1.7400897176647045
snrgm7.540115100791576
snrtotal7.850686617559525
snrwm14.271855034222291
snrdcsf40.04825535718374
snrdgm71.97921018420188
snrdtotal66.86365417662138
snrdwm88.56349698847856
spacingx0.800000011920929
spacingy0.800000011920929
spacingz0.800000011920929
summarybgk2615.446151501597
summarybgmad7.397605023942769
summarybgmean151.7511444091797
summarybgmedian151.73475646972656
summarybgn8981167.0
summarybgp05139.56400451660159
summarybgp95164.51165313720702
summarybgstdv9.193519592285156
summarycsfk19.273886097295495
summarycsfmad101.09226929403786
summarycsfmean504.12432861328125
summarycsfmedian452.2129821777344
summarycsfn193896.0
summarycsfp05318.4884262084961
summarycsfp95799.9597320556641
summarycsfstdv259.8784484863281
summarygmk-0.16527462430817286
summarygmmad110.02358124857737
summarygmmean826.5736694335938
summarygmmedian812.767822265625
summarygmn141410.0
summarygmp05670.3923980712891
summarygmp951018.5350646972655
summarygmstdv107.7921142578125
summarywmk4.068143161488113
summarywmmad60.11714909992091
summarywmmean1006.779296875
summarywmmedian1000.0326538085938
summarywmn474500.0
summarywmp05907.2519836425781
summarywmp951126.3437927246093
summarywmstdv70.0701904296875
tpmoverlapcsf0.08928696811199188
tpmoverlapgm0.3456341624259949
tpmoverlapwm0.4490286111831665
wm2max0.35304145354820565
AcquisitionMatrixPE320
AcquisitionNumber1
AcquisitionTime12:35:20.922500
BaseResolution320
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20200427
DeviceSerialNumber167017
DwellTime6.6e-06
EchoTime0.00314
FlipAngle9
ImageOrientationPatientDICOM[-0.0900088, 0.994584, 0.0519753, -0.0261963, 0.0498048, -0.998415]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM', 'FM', 'FIL']
ImagingFrequency123.25
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressUniversity_Street_3801_Montreal_District_CA_H3A_2B4
InstitutionNameMc_Connell_Brain_Imaging_Centre
InstitutionalDepartmentNameDepartment
InversionTime0.9
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
ParallelReductionFactorInPlane2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps319
PhaseResolution1
PixelBandwidth235
ProcedureStepDescriptionFunctional_Dr.Bernhardt
ProtocolNamemprage-0.8iso
PulseSequenceDetails%SiemensSeq%_tfl
ReceiveCoilActiveElementsHC1-7
ReceiveCoilNameHeadNeck_64
ReconMatrixPE320
RefLinesPE32
RepetitionTime2.3
SAR0.0496285
ScanOptionsIR
ScanningSequenceGR_IR
SequenceName_tfl3d1_16ns
SequenceVariantSK_SP_MP
SeriesDescriptionmprage-0.8iso
SeriesNumber20
ShimSetting[342, -11586, -6477, 456, 48, -351, -114, 29]
SliceThickness0.8
SoftwareVersionssyngo_MR_E11
StationNameMRC35056
TxRefAmp222.82
md5sumdc4406630d430341de1abe599cea1ebb
softwaremriqc
version0.15.2
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.