MRIQC: individual T1w report

Summary

  • BIDS filename: sub-HC13_ses-pre_run-2_T1w.
  • Date and time: 2020-07-23, 00:30.
  • MRIQC version: 0.15.2.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.8632213731589089
cnr1.5062204805417057
efc0.6905090523135836
fber29.376428604125977
fwhmavg3.333629116991722
fwhmx3.368474949805812
fwhmy3.369249949794263
fwhmz3.26316245137509
icvscsf0.21955401850667372
icvsgm0.4383741108464944
icvswm0.34207187064683187
inumed1.3968517780303955
inurange0.6748167991638183
qi10.0
qi20.0031419132157855076
rpvecsf22.510362673830596
rpvegm11.659864555446326
rpvewm16.355767635272052
sizex224
sizey320
sizez320
snrcsf1.6233511473632596
snrgm7.624389407018197
snrtotal8.035308199486803
snrwm14.858184044078952
snrdcsf40.865646362938335
snrdgm73.62837772865709
snrdtotal68.46277961163975
snrdwm90.8943147433238
spacingx0.800000011920929
spacingy0.800000011920929
spacingz0.800000011920929
summarybgk2665.2751324513833
summarybgmad7.207868317298994
summarybgmean148.37155151367188
summarybgmedian148.3658447265625
summarybgn8962609.0
summarybgp05136.51168823242188
summarybgp95160.8223114013672
summarybgstdv9.35523796081543
summarycsfk16.425098483483207
summarycsfmad98.79945717786443
summarycsfmean511.3703308105469
summarycsfmedian449.6074523925781
summarycsfn185852.0
summarycsfp05321.6974182128906
summarycsfp95936.4181732177716
summarycsfstdv276.9617919921875
summarygmk-0.10410223221267101
summarygmmad105.92692436777438
summarygmmean825.8129272460938
summarygmmedian810.06591796875
summarygmn146982.0
summarygmp05673.8508728027343
summarygmp951018.7004272460937
summarygmstdv106.24629974365234
summarywmk4.263694845898449
summarywmmad58.05178575548903
summarywmmean1005.7791137695312
summarywmmedian1000.0272827148438
summarywmn473813.0
summarywmp05909.0392700195313
summarywmp951119.283203125
summarywmstdv67.30474090576172
tpmoverlapcsf0.09114207327365875
tpmoverlapgm0.3538292348384857
tpmoverlapwm0.45142367482185364
wm2max0.3513114513653707
AcquisitionMatrixPE320
AcquisitionNumber1
AcquisitionTime11:42:30.627500
BaseResolution320
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20200427
DeviceSerialNumber167017
DwellTime6.6e-06
EchoTime0.00314
FlipAngle9
ImageOrientationPatientDICOM[-0.0900088, 0.994584, 0.0519753, -0.0261963, 0.0498048, -0.998415]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM', 'FM', 'FIL']
ImagingFrequency123.25
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressUniversity_Street_3801_Montreal_District_CA_H3A_2B4
InstitutionNameMc_Connell_Brain_Imaging_Centre
InstitutionalDepartmentNameDepartment
InversionTime0.9
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
ParallelReductionFactorInPlane2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps319
PhaseResolution1
PixelBandwidth235
ProcedureStepDescriptionFunctional_Dr.Bernhardt
ProtocolNamemprage-0.8iso
PulseSequenceDetails%SiemensSeq%_tfl
ReceiveCoilActiveElementsHC1-7
ReceiveCoilNameHeadNeck_64
ReconMatrixPE320
RefLinesPE32
RepetitionTime2.3
SAR0.0496285
ScanOptionsIR
ScanningSequenceGR_IR
SequenceName_tfl3d1_16ns
SequenceVariantSK_SP_MP
SeriesDescriptionmprage-0.8iso
SeriesNumber7
ShimSetting[342, -11586, -6477, 456, 48, -351, -114, 29]
SliceThickness0.8
SoftwareVersionssyngo_MR_E11
StationNameMRC35056
TxRefAmp222.82
md5sum5e8d54c8b5dbde83e90ca616d1888941
softwaremriqc
version0.15.2
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.