MRIQC: individual T1w report

Summary

  • BIDS filename: sub-HC14_ses-pre_run-1_T1w.
  • Date and time: 2020-07-23, 02:14.
  • MRIQC version: 0.15.2.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.6295106318703655
cnr1.9315546703928934
efc0.706397135769693
fber33.71464157104492
fwhmavg3.3468457834614447
fwhmx3.3559874499918902
fwhmy3.4326499488495297
fwhmz3.2518999515429146
icvscsf0.21751834431454564
icvsgm0.4059874480861637
icvswm0.37649420759929064
inumed1.448919415473938
inurange0.5931941866874695
qi10.0
qi20.004409858353063499
rpvecsf20.00815811155281
rpvegm10.974822466107167
rpvewm13.763812662736784
sizex224
sizey320
sizez320
snrcsf1.9473520628869916
snrgm8.351879869432857
snrtotal8.716373570687528
snrwm15.849888779742738
snrdcsf42.30471702360501
snrdgm73.21720097714665
snrdtotal69.73768930175196
snrdwm93.69114990450421
spacingx0.800000011920929
spacingy0.800000011920929
spacingz0.800000011920929
summarybgk30.24585231424441
summarybgmad6.992929906684648
summarybgmean137.4361114501953
summarybgmedian137.2788848876953
summarybgn7451005.0
summarybgp05125.76799011230469
summarybgp95149.77480773925782
summarybgstdv7.995789527893066
summarycsfk22.468556346218914
summarycsfmad112.38756442461744
summarycsfmean496.0700988769531
summarycsfmedian451.5608215332031
summarycsfn162769.0
summarycsfp05316.8953369140625
summarycsfp95726.545349121094
summarycsfstdv231.88381958007812
summarygmk0.6331246402624369
summarygmmad82.57019325682413
summarygmmean796.7886352539062
summarygmmedian781.5208740234375
summarygmn69084.0
summarygmp05668.4313812255859
summarygmp95977.6288909912108
summarygmstdv93.57357025146484
summarywmk2.555516145221681
summarywmmad55.002470065908184
summarywmmean1006.369873046875
summarywmmedian1000.0599365234375
summarywmn591384.0
summarywmp05916.6511413574219
summarywmp951116.896795654297
summarywmstdv63.09565353393555
tpmoverlapcsf0.12445295602083206
tpmoverlapgm0.3795277178287506
tpmoverlapwm0.47199636697769165
wm2max0.3546136641461972
AcquisitionMatrixPE320
AcquisitionNumber1
AcquisitionTime15:00:42.737500
BaseResolution320
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20200427
DeviceSerialNumber167017
DwellTime6.6e-06
EchoTime0.00314
FlipAngle9
ImageOrientationPatientDICOM[-0.023458, 0.99967, 0.0104718, -0.001579, 0.0104376, -0.999944]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM', 'FM', 'FIL']
ImagingFrequency123.25
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressUniversity_Street_3801_Montreal_District_CA_H3A_2B4
InstitutionNameMc_Connell_Brain_Imaging_Centre
InstitutionalDepartmentNameDepartment
InversionTime0.9
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
ParallelReductionFactorInPlane2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps319
PhaseResolution1
PixelBandwidth235
ProcedureStepDescriptionFunctional_Dr.Bernhardt
ProtocolNamemprage-0.8iso
PulseSequenceDetails%SiemensSeq%_tfl
ReceiveCoilActiveElementsHC1-7
ReceiveCoilNameHeadNeck_64
ReconMatrixPE320
RefLinesPE32
RepetitionTime2.3
SAR0.0585039
ScanOptionsIR
ScanningSequenceGR_IR
SequenceName_tfl3d1_16ns
SequenceVariantSK_SP_MP
SeriesDescriptionmprage-0.8iso
SeriesNumber19
ShimSetting[320, -11598, -6466, 419, 15, -317, -61, 10]
SliceThickness0.8
SoftwareVersionssyngo_MR_E11
StationNameMRC35056
TxRefAmp250.359
md5sumce2abef8ef99cf390f5472b8fbc9f5c9
softwaremriqc
version0.15.2
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.