MRIQC: individual T1w report

Summary

  • BIDS filename: sub-HC15_ses-pre_run-2_T1w.
  • Date and time: 2020-07-23, 03:15.
  • MRIQC version: 0.15.2.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.48165784801545725
cnr2.501691026595576
efc0.6837972694526413
fber21.869098663330078
fwhmavg3.3903291161468263
fwhmx3.4607249484311797
fwhmy3.4570374484861275
fwhmz3.253224951523171
icvscsf0.22705395443083562
icvsgm0.41458353591302133
icvswm0.3583625096561431
inumed1.469878077507019
inurange0.49594168663024907
qi10.0
qi20.004480589635950361
rpvecsf25.87219080414401
rpvegm14.325536921043867
rpvewm18.557826109973163
sizex224
sizey320
sizez320
snrcsf2.709770753139618
snrgm10.126263978833988
snrtotal9.414659510619344
snrwm15.407943799884427
snrdcsf34.08249041104045
snrdgm65.3023170522977
snrdtotal62.06138867537327
snrdwm86.79935856278166
spacingx0.800000011920929
spacingy0.800000011920929
spacingz0.800000011920929
summarybgk12.607656710274576
summarybgmad7.547887716471039
summarybgmean158.1967010498047
summarybgmedian158.10084533691406
summarybgn8110837.0
summarybgp05145.77362060546875
summarybgp95171.26109619140624
summarybgstdv8.290905952453613
summarycsfk42.5339099612236
summarycsfmad67.22452731934084
summarycsfmean415.9035339355469
summarycsfmedian392.6675720214844
summarycsfn146599.0
summarycsfp05293.74195556640626
summarycsfp95578.759490966797
summarycsfstdv144.9075469970703
summarygmk0.6103352025006887
summarygmmad68.34050582640384
summarygmmean759.2380981445312
summarygmmedian752.3541259765625
summarygmn75614.0
summarygmp05648.6608764648437
summarygmp95895.0426727294921
summarygmstdv74.29681396484375
summarywmk12.415019721719734
summarywmmad50.95142057756898
summarywmmean1005.9550170898438
summarywmmedian1000.0235595703125
summarywmn417637.0
summarywmp05919.5725708007812
summarywmp951106.6440185546876
summarywmstdv64.90303802490234
tpmoverlapcsf0.122835174202919
tpmoverlapgm0.3752492070198059
tpmoverlapwm0.4361286461353302
wm2max0.3184883734079714
AcquisitionMatrixPE320
AcquisitionNumber1
AcquisitionTime14:35:16.637500
BaseResolution320
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20200427
DeviceSerialNumber167017
DwellTime6.6e-06
EchoTime0.00314
FlipAngle9
ImageOrientationPatientDICOM[-0.00714502, 0.972183, 0.234115, 0.00731636, 0.234166, -0.972169]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM', 'FM', 'FIL']
ImagingFrequency123.25
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressUniversity_Street_3801_Montreal_District_CA_H3A_2B4
InstitutionNameMc_Connell_Brain_Imaging_Centre
InstitutionalDepartmentNameDepartment
InversionTime0.9
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
ParallelReductionFactorInPlane2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps319
PhaseResolution1
PixelBandwidth235
ProcedureStepDescriptionFunctional_Dr.Bernhardt
ProtocolNamemprage-0.8iso
PulseSequenceDetails%SiemensSeq%_tfl
ReceiveCoilActiveElementsHC1-7
ReceiveCoilNameHeadNeck_64
ReconMatrixPE320
RefLinesPE32
RepetitionTime2.3
SAR0.04043
ScanOptionsIR
ScanningSequenceGR_IR
SequenceName_tfl3d1_16ns
SequenceVariantSK_SP_MP
SeriesDescriptionmprage-0.8iso
SeriesNumber7
ShimSetting[321, -11620, -6470, 362, 79, -263, -109, 19]
SliceThickness0.8
SoftwareVersionssyngo_MR_E11
StationNameMRC35056
TxRefAmp213.963
md5sum843177d9320eeab36314d6d350e43e15
softwaremriqc
version0.15.2
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.