MRIQC: individual T1w report

Summary

  • BIDS filename: sub-HC17_ses-pre_run-1_T1w.
  • Date and time: 2020-07-23, 06:21.
  • MRIQC version: 0.15.2.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.7130000743824336
cnr1.7731113895926827
efc0.694473108683254
fber36.76713562011719
fwhmavg3.5423666138812906
fwhmx3.496487447898277
fwhmy3.6057624462699525
fwhmz3.5248499474756425
icvscsf0.2001565550544347
icvsgm0.41807107345876715
icvswm0.3817723714867982
inumed1.3744256496429443
inurange0.6391824305057521
qi10.0
qi20.004660877187296894
rpvecsf20.593851273305308
rpvegm10.301896874653181
rpvewm13.077372771510296
sizex224
sizey320
sizez320
snrcsf1.1103225008712432
snrgm7.679178692483085
snrtotal8.244214554636411
snrwm15.943142470554905
snrdcsf44.939392632609476
snrdgm76.51054495551713
snrdtotal72.98302033830915
snrdwm97.49912342680081
spacingx0.800000011920929
spacingy0.800000011920929
spacingz0.800000011920929
summarybgk16742.777953238
summarybgmad6.7196022699050975
summarybgmean134.8813018798828
summarybgmedian134.61587524414062
summarybgn7351321.0
summarybgp05123.52041625976562
summarybgp95146.76792907714844
summarybgstdv19.055315017700195
summarycsfk4.254250013372027
summarycsfmad116.21182119993603
summarycsfmean604.1695556640625
summarycsfmedian460.934326171875
summarycsfn157324.0
summarycsfp05324.4254638671875
summarycsfp951735.042797851563
summarycsfstdv415.13421630859375
summarygmk-0.008032665273533635
summarygmmad99.66862186956037
summarygmmean801.1199951171875
summarygmmedian784.7532958984375
summarygmn135724.0
summarygmp05658.0922790527344
summarygmp95988.4886108398437
summarygmstdv102.19197082519531
summarywmk3.862858432511193
summarywmmad53.822921731055864
summarywmmean1005.9183959960938
summarywmmedian1000.0289306640625
summarywmn661088.0
summarywmp05916.6780242919922
summarywmp951114.6549804687502
summarywmstdv62.72465896606445
tpmoverlapcsf0.10291902720928192
tpmoverlapgm0.359618216753006
tpmoverlapwm0.48057296872138977
wm2max0.32215379008889883
AcquisitionMatrixPE320
AcquisitionNumber1
AcquisitionTime16:06:50.892500
BaseResolution320
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20200427
DeviceSerialNumber167017
DwellTime6.6e-06
EchoTime0.00314
FlipAngle9
ImageOrientationPatientDICOM[0.0210371, 0.988168, 0.151928, -0.0142184, 0.152242, -0.988241]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM', 'FM', 'FIL']
ImagingFrequency123.25
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressUniversity_Street_3801_Montreal_District_CA_H3A_2B4
InstitutionNameMc_Connell_Brain_Imaging_Centre
InstitutionalDepartmentNameDepartment
InversionTime0.9
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
ParallelReductionFactorInPlane2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps319
PhaseResolution1
PixelBandwidth235
ProcedureStepDescriptionFunctional_Dr.Bernhardt
ProtocolNamemprage-0.8iso
PulseSequenceDetails%SiemensSeq%_tfl
ReceiveCoilActiveElementsHC1-7
ReceiveCoilNameHeadNeck_64
ReconMatrixPE320
RefLinesPE32
RepetitionTime2.3
SAR0.057978
ScanOptionsIR
ScanningSequenceGR_IR
SequenceName_tfl3d1_16ns
SequenceVariantSK_SP_MP
SeriesDescriptionmprage-0.8iso
SeriesNumber19
ShimSetting[313, -11633, -6447, 324, 57, -339, 134, 7]
SliceThickness0.8
SoftwareVersionssyngo_MR_E11
StationNameMRC35056
TxRefAmp253.806
md5sum43a51de984f0a0b19c91277732a73cb0
softwaremriqc
version0.15.2
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.