MRIQC: individual T1w report

Summary

  • BIDS filename: sub-HC24_ses-pre_run-1_T1w.
  • Date and time: 2020-07-23, 19:06.
  • MRIQC version: 0.15.2.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.5592829410346615
cnr2.149111609421446
efc0.6890088880683094
fber37.98170852661133
fwhmavg3.472808281584457
fwhmx3.4933374479452155
fwhmy3.4830374480986976
fwhmz3.442049948709459
icvscsf0.18158938003859998
icvsgm0.4282834798004493
icvswm0.3901271401609508
inumed1.3362177610397339
inurange0.5747827053070067
qi10.00015450715881230067
qi20.004048051049248976
rpvecsf23.526847173337437
rpvegm10.766595942498867
rpvewm13.431772781881522
sizex224
sizey320
sizez320
snrcsf1.3887073990001373
snrgm9.009690516896708
snrtotal8.76073588172855
snrwm15.883809729288805
snrdcsf45.893360800552934
snrdgm79.36994339559027
snrdtotal76.06271610700229
snrdwm102.92484412486365
spacingx0.800000011920929
spacingy0.800000011920929
spacingz0.800000011920929
summarybgk38.77198184873235
summarybgmad6.365421051446178
summarybgmean129.59547424316406
summarybgmedian129.5264129638672
summarybgn8197020.0
summarybgp05119.07743835449219
summarybgp95140.6013946533203
summarybgstdv7.105312824249268
summarycsfk11.130309791351635
summarycsfmad106.84925243858237
summarycsfmean528.37353515625
summarycsfmedian445.90802001953125
summarycsfn109659.0
summarycsfp05311.1326873779297
summarycsfp951342.4327148437487
summarycsfstdv321.0942687988281
summarygmk0.6840699722025438
summarygmmad75.55086264229958
summarygmmean785.47119140625
summarygmmedian771.1724243164062
summarygmn117478.0
summarygmp05668.6873992919922
summarygmp95949.8782012939453
summarygmstdv85.59329986572266
summarywmk5.395177914874331
summarywmmad52.448637069651774
summarywmmean1004.2841796875
summarywmmedian1000.0360107421875
summarywmn611966.0
summarywmp05913.2872161865234
summarywmp951104.49853515625
summarywmstdv62.95940399169922
tpmoverlapcsf0.11422503739595413
tpmoverlapgm0.3758474886417389
tpmoverlapwm0.4732227921485901
wm2max0.35200326846914964
AcquisitionMatrixPE320
AcquisitionNumber1
AcquisitionTime15:04:52.845000
BaseResolution320
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20200427
DeviceSerialNumber167017
DwellTime6.6e-06
EchoTime0.00314
FlipAngle9
ImageOrientationPatientDICOM[-0.00224625, 0.986994, -0.160741, 0.00514746, -0.160728, -0.986985]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM', 'FM', 'FIL']
ImagingFrequency123.25
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressUniversity_Street_3801_Montreal_District_CA_H3A_2B4
InstitutionNameMc_Connell_Brain_Imaging_Centre
InstitutionalDepartmentNameDepartment
InversionTime0.9
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
ParallelReductionFactorInPlane2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps319
PhaseResolution1
PixelBandwidth235
ProcedureStepDescriptionFunctional_Dr.Bernhardt
ProtocolNamemprage-0.8iso
PulseSequenceDetails%SiemensSeq%_tfl
ReceiveCoilActiveElementsHC1-7
ReceiveCoilNameHeadNeck_64
ReconMatrixPE320
RefLinesPE32
RepetitionTime2.3
SAR0.0472886
ScanOptionsIR
ScanningSequenceGR_IR
SequenceName_tfl3d1_16ns
SequenceVariantSK_SP_MP
SeriesDescriptionmprage-0.8iso
SeriesNumber20
ShimSetting[312, -11564, -6440, 338, 0, -369, 62, 19]
SliceThickness0.8
SoftwareVersionssyngo_MR_E11
StationNameMRC35056
TxRefAmp235.596
md5sum0f8ada4f45eb9940316916dc2706b899
softwaremriqc
version0.15.2
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.