MRIQC: individual T1w report

Summary

  • BIDS filename: sub-HC25_ses-pre_run-2_T1w.
  • Date and time: 2020-07-23, 20:08.
  • MRIQC version: 0.15.2.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.6446327072415481
cnr1.8757409934227698
efc0.6872182002433758
fber26.856447219848633
fwhmavg3.644591612358019
fwhmx3.580537446645834
fwhmy3.718949944583327
fwhmz3.634287445844897
icvscsf0.23381416217430195
icvsgm0.418490634197395
icvswm0.34769520362830303
inumed1.4546265602111816
inurange0.7195737063884735
qi10.0
qi20.00432438724936941
rpvecsf18.91507725500593
rpvegm10.884071538805113
rpvewm14.849833931692462
sizex224
sizey320
sizez320
snrcsf1.7233738972345094
snrgm8.560000535310683
snrtotal8.491330264177316
snrwm15.190616359986754
snrdcsf40.76077600434023
snrdgm70.10711166770997
snrdtotal66.63843793505087
snrdwm89.04742613310245
spacingx0.800000011920929
spacingy0.800000011920929
spacingz0.800000011920929
summarybgk7.147414468555565
summarybgmad7.357404460248244
summarybgmean150.0819549560547
summarybgmedian149.94943237304688
summarybgn8470156.0
summarybgp05137.7677001953125
summarybgp95163.03691864013672
summarybgstdv8.096656799316406
summarycsfk18.68099805375076
summarycsfmad107.6231528794524
summarycsfmean508.5451965332031
summarycsfmedian457.75738525390625
summarycsfn212382.0
summarycsfp05311.36743621826173
summarycsfp95837.9162994384748
summarycsfstdv265.6163635253906
summarygmk0.6117419548315972
summarygmmad86.64816377543711
summarygmmean799.700439453125
summarygmmedian787.3267211914062
summarygmn126285.0
summarygmp05671.2453125
summarygmp95968.4627441406249
summarygmstdv91.97705078125
summarywmk14.261039140347123
summarywmmad50.469194794950795
summarywmmean1007.076416015625
summarywmmedian1000.0328979492188
summarywmn574962.0
summarywmp05922.0828918457031
summarywmp951110.7520935058594
summarywmstdv65.83222198486328
tpmoverlapcsf0.10922638326883316
tpmoverlapgm0.368344247341156
tpmoverlapwm0.48449379205703735
wm2max0.323042491444282
AcquisitionMatrixPE320
AcquisitionNumber1
AcquisitionTime16:18:25.805000
BaseResolution320
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20200427
DeviceSerialNumber167017
DwellTime6.6e-06
EchoTime0.00314
FlipAngle9
ImageOrientationPatientDICOM[-0.0273099, 0.996249, 0.0821118, -0.00605391, 0.0819761, -0.996616]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM', 'FM', 'FIL']
ImagingFrequency123.25
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressUniversity_Street_3801_Montreal_District_CA_H3A_2B4
InstitutionNameMc_Connell_Brain_Imaging_Centre
InstitutionalDepartmentNameDepartment
InversionTime0.9
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
ParallelReductionFactorInPlane2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps319
PhaseResolution1
PixelBandwidth235
ProcedureStepDescriptionFunctional_Dr.Bernhardt
ProtocolNamemprage-0.8iso
PulseSequenceDetails%SiemensSeq%_tfl
ReceiveCoilActiveElementsHC1-7
ReceiveCoilNameHeadNeck_64
ReconMatrixPE320
RefLinesPE32
RepetitionTime2.3
SAR0.0417683
ScanOptionsIR
ScanningSequenceGR_IR
SequenceName_tfl3d1_16ns
SequenceVariantSK_SP_MP
SeriesDescriptionmprage-0.8iso
SeriesNumber7
ShimSetting[327, -11611, -6461, 439, 56, -252, -76, -17]
SliceThickness0.8
SoftwareVersionssyngo_MR_E11
StationNameMRC35056
TxRefAmp220.965
md5sum91db2b75e81a717bca150e5f148ff2dc
softwaremriqc
version0.15.2
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.