MRIQC: individual T1w report

Summary

  • BIDS filename: sub-HC26_ses-pre_run-2_T1w.
  • Date and time: 2020-07-23, 21:32.
  • MRIQC version: 0.15.2.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.45361004801422306
cnr2.513906303117969
efc0.6929312691986248
fber43.084800720214844
fwhmavg3.6197874460609634
fwhmx3.5776499466888616
fwhmy3.694499944947661
fwhmz3.587212446546369
icvscsf0.21038042216455488
icvsgm0.41124448475325215
icvswm0.37837509308219297
inumed1.411156177520752
inurange0.6519794702529904
qi10.0
qi20.004023519918091449
rpvecsf18.458651383482636
rpvegm9.822197194688545
rpvewm12.341624477934804
sizex224
sizey320
sizez320
snrcsf1.3344835300462654
snrgm9.215629216707766
snrtotal9.357633796728136
snrwm17.52278864343037
snrdcsf49.01390979467805
snrdgm80.97749161759104
snrdtotal79.33951064359091
snrdwm108.02713051850361
spacingx0.800000011920929
spacingy0.800000011920929
spacingz0.800000011920929
summarybgk16.901100279279056
summarybgmad6.064719930102544
summarybgmean119.253173828125
summarybgmedian119.13087463378906
summarybgn7253148.0
summarybgp05109.14347839355469
summarybgp95129.95790100097656
summarybgstdv6.932644844055176
summarycsfk10.8216120981071
summarycsfmad123.220994215643
summarycsfmean539.3204345703125
summarycsfmedian453.7309265136719
summarycsfn178249.0
summarycsfp05304.3924987792969
summarycsfp951407.1083007812501
summarycsfstdv340.0039367675781
summarygmk1.741130662951491
summarygmmad66.10121905277472
summarygmmean761.68701171875
summarygmmedian749.623779296875
summarygmn118671.0
summarygmp05651.1112060546875
summarygmp95918.245849609375
summarygmstdv81.34231567382812
summarywmk6.713890819476434
summarywmmad47.4843538417399
summarywmmean1003.9317626953125
summarywmmedian1000.02734375
summarywmn683349.0
summarywmp05921.8389282226562
summarywmp951095.1371337890625
summarywmstdv57.07006072998047
tpmoverlapcsf0.10559433698654175
tpmoverlapgm0.3757972717285156
tpmoverlapwm0.4585418999195099
wm2max0.3618223731801522
AcquisitionMatrixPE320
AcquisitionNumber1
AcquisitionTime16:21:31.822500
BaseResolution320
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20200427
DeviceSerialNumber167017
DwellTime6.6e-06
EchoTime0.00314
FlipAngle9
ImageOrientationPatientDICOM[-0.051664, 0.997553, 0.0471063, -0.000188254, 0.0471596, -0.998887]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM', 'FM', 'FIL']
ImagingFrequency123.25
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressUniversity_Street_3801_Montreal_District_CA_H3A_2B4
InstitutionNameMc_Connell_Brain_Imaging_Centre
InstitutionalDepartmentNameDepartment
InversionTime0.9
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
ParallelReductionFactorInPlane2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps319
PhaseResolution1
PixelBandwidth235
ProcedureStepDescriptionFunctional_Dr.Bernhardt
ProtocolNamemprage-0.8iso
PulseSequenceDetails%SiemensSeq%_tfl
ReceiveCoilActiveElementsHC1-7
ReceiveCoilNameHeadNeck_64
ReconMatrixPE320
RefLinesPE32
RepetitionTime2.3
SAR0.0597947
ScanOptionsIR
ScanningSequenceGR_IR
SequenceName_tfl3d1_16ns
SequenceVariantSK_SP_MP
SeriesDescriptionmprage-0.8iso
SeriesNumber7
ShimSetting[301, -11589, -6447, 462, -33, -210, 6, 13]
SliceThickness0.8
SoftwareVersionssyngo_MR_E11
StationNameMRC35056
TxRefAmp244.173
md5sumd675f0d2134347f9aa73382e0b1d9228
softwaremriqc
version0.15.2
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.