MRIQC: individual T1w report

Summary

  • BIDS filename: sub-HC27_ses-pre_run-1_T1w.
  • Date and time: 2020-07-23, 23:16.
  • MRIQC version: 0.15.2.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.7750926965762225
cnr1.6246046940997203
efc0.7077974911853808
fber34.29991912841797
fwhmavg3.418841615721957
fwhmx3.3398999502316125
fwhmy3.4954999479129922
fwhmz3.4211249490212654
icvscsf0.2298444917887219
icvsgm0.4189305088417308
icvswm0.3512249993695473
inumed1.4084089994430542
inurange0.8168778181076045
qi10.0
qi20.005105842694768603
rpvecsf17.93888570385377
rpvegm9.83669699058502
rpvewm13.150233151848282
sizex224
sizey320
sizez320
snrcsf1.2818419942039738
snrgm8.012720032333455
snrtotal8.07719565550014
snrwm14.937024939962988
snrdcsf46.498970486406655
snrdgm77.84054441227403
snrdtotal73.88179930421167
snrdwm97.30588301395434
spacingx0.800000011920929
spacingy0.800000011920929
spacingz0.800000011920929
summarybgk6153.191500928206
summarybgmad6.7329270487548865
summarybgmean139.1143341064453
summarybgmedian138.74710083007812
summarybgn8119627.0
summarybgp05127.70305633544922
summarybgp95150.53370208740233
summarybgstdv26.696441650390625
summarycsfk8.670183040938369
summarycsfmad124.15890933675237
summarycsfmean581.923583984375
summarycsfmedian477.8763427734375
summarycsfn175700.0
summarycsfp05314.84288635253904
summarycsfp951569.9789428710922
summarycsfstdv372.8033447265625
summarygmk0.08303336154246477
summarygmmad97.79790436082219
summarygmmean806.0797729492188
summarygmmedian799.97802734375
summarygmn125455.0
summarygmp05650.087744140625
summarygmp95978.2760437011718
summarygmstdv99.8381118774414
summarywmk2.9520096343427342
summarywmmad57.257818966843516
summarywmmean1005.685302734375
summarywmmedian1000.0260009765625
summarywmn563189.0
summarywmp05908.891552734375
summarywmp951119.8549804687498
summarywmstdv66.94941711425781
tpmoverlapcsf0.09098085761070251
tpmoverlapgm0.30422577261924744
tpmoverlapwm0.43550533056259155
wm2max0.35547727607151897
AcquisitionMatrixPE320
AcquisitionNumber1
AcquisitionTime17:11:16.642500
BaseResolution320
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20200427
DeviceSerialNumber167017
DwellTime6.6e-06
EchoTime0.00314
FlipAngle9
ImageOrientationPatientDICOM[0.023344, 0.981263, 0.191255, 0.0316305, 0.190487, -0.98118]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM', 'FM', 'FIL']
ImagingFrequency123.25
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressUniversity_Street_3801_Montreal_District_CA_H3A_2B4
InstitutionNameMc_Connell_Brain_Imaging_Centre
InstitutionalDepartmentNameDepartment
InversionTime0.9
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
ParallelReductionFactorInPlane2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps319
PhaseResolution1
PixelBandwidth235
ProcedureStepDescriptionFunctional_Dr.Bernhardt
ProtocolNamemprage-0.8iso
PulseSequenceDetails%SiemensSeq%_tfl
ReceiveCoilActiveElementsHC1-7
ReceiveCoilNameHeadNeck_64
ReconMatrixPE320
RefLinesPE32
RepetitionTime2.3
SAR0.0559223
ScanOptionsIR
ScanningSequenceGR_IR
SequenceName_tfl3d1_16ns
SequenceVariantSK_SP_MP
SeriesDescriptionmprage-0.8iso
SeriesNumber19
ShimSetting[322, -11601, -6421, 319, -30, -318, 28, -10]
SliceThickness0.8
SoftwareVersionssyngo_MR_E11
StationNameMRC35056
TxRefAmp258.701
md5sumd781ca72a81f1a4bd243c0572653dcec
softwaremriqc
version0.15.2
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.