MRIQC: individual T1w report

Summary

  • BIDS filename: sub-HC28_ses-pre_run-1_T1w.
  • Date and time: 2020-07-24, 00:41.
  • MRIQC version: 0.15.2.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.7951959548302551
cnr1.5937440929085964
efc0.6871914433922427
fber35.881675720214844
fwhmavg3.1962749523717915
fwhmx3.186524952517078
fwhmy3.228562451890671
fwhmz3.1737374527076265
icvscsf0.20737453472294182
icvsgm0.4363890866237864
icvswm0.3562363786532718
inumed1.388999104499817
inurange0.6753495931625366
qi10.0
qi20.0036387485867839693
rpvecsf23.042796031673795
rpvegm11.406776805136836
rpvewm15.485005167816242
sizex224
sizey320
sizez320
snrcsf1.18891371268589
snrgm7.841751262730065
snrtotal7.9143194267081896
snrwm14.712293304708615
snrdcsf50.14176653717552
snrdgm78.96580012481303
snrdtotal75.84224022528831
snrdwm98.4191540138764
spacingx0.800000011920929
spacingy0.800000011920929
spacingz0.800000011920929
summarybgk4479.853015882014
summarybgmad6.656824237123831
summarybgmean137.42349243164062
summarybgmedian137.11532592773438
summarybgn8020970.0
summarybgp05126.41033515930177
summarybgp95148.95176696777344
summarybgstdv17.109586715698242
summarycsfk3.332432460133356
summarycsfmad144.10927045491934
summarycsfmean658.3633422851562
summarycsfmedian509.4892272949219
summarycsfn145599.0
summarycsfp05335.11630859375003
summarycsfp951772.1252197265626
summarycsfstdv428.53192138671875
summarygmk0.11385233035780074
summarygmmad97.60425392456719
summarygmmean816.404541015625
summarygmmedian802.3695068359375
summarygmn109201.0
summarygmp05667.6751098632812
summarygmp951003.2246704101562
summarygmstdv102.3197250366211
summarywmk1.8316438683357967
summarywmmad59.57818554929716
summarywmmean1007.456298828125
summarywmmedian1000.0345458984375
summarywmn498674.0
summarywmp05910.8257781982422
summarywmp951130.9298889160154
summarywmstdv67.97264862060547
tpmoverlapcsf0.09960015118122101
tpmoverlapgm0.3626478314399719
tpmoverlapwm0.474380761384964
wm2max0.28374388560193037
AcquisitionMatrixPE320
AcquisitionNumber1
AcquisitionTime15:57:18.477500
BaseResolution320
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20200427
DeviceSerialNumber167017
DwellTime6.6e-06
EchoTime0.00314
FlipAngle9
ImageOrientationPatientDICOM[0.0543352, 0.997152, -0.0523019, 0.0332124, -0.0541551, -0.99798]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM', 'FM', 'FIL']
ImagingFrequency123.25
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressUniversity_Street_3801_Montreal_District_CA_H3A_2B4
InstitutionNameMc_Connell_Brain_Imaging_Centre
InstitutionalDepartmentNameDepartment
InversionTime0.9
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
ParallelReductionFactorInPlane2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps319
PhaseResolution1
PixelBandwidth235
ProcedureStepDescriptionFunctional_Dr.Bernhardt
ProtocolNamemprage-0.8iso
PulseSequenceDetails%SiemensSeq%_tfl
ReceiveCoilActiveElementsHC1-7
ReceiveCoilNameHeadNeck_64
ReconMatrixPE320
RefLinesPE32
RepetitionTime2.3
SAR0.0598159
ScanOptionsIR
ScanningSequenceGR_IR
SequenceName_tfl3d1_16ns
SequenceVariantSK_SP_MP
SeriesDescriptionmprage-0.8iso
SeriesNumber19
ShimSetting[310, -11556, -6457, 295, -34, -513, -3, 9]
SliceThickness0.8
SoftwareVersionssyngo_MR_E11
StationNameMRC35056
TxRefAmp251.877
md5sumec2f9192ed97b536d308f96b512e746d
softwaremriqc
version0.15.2
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.