MRIQC: individual T1w report

Summary

  • BIDS filename: sub-HC30_ses-pre_run-1_T1w.
  • Date and time: 2020-07-24, 03:01.
  • MRIQC version: 0.15.2.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.5155572934971472
cnr2.159409978870791
efc0.6818789572226627
fber22.505416870117188
fwhmavg3.6964499449186032
fwhmx3.6391874457718814
fwhmy3.7817124436480936
fwhmz3.6684499453358357
icvscsf0.24196060262601216
icvsgm0.406632128823699
icvswm0.3514072685502888
inumed1.6211493015289307
inurange0.6008796393871307
qi10.0
qi20.003781195497988261
rpvecsf23.60497075054273
rpvegm14.002689545536084
rpvewm18.425748892888198
sizex224
sizey320
sizez320
snrcsf1.5364151824041627
snrgm9.2118031067452
snrtotal7.862965643554131
snrwm12.840678641513032
snrdcsf33.94275082009057
snrdgm62.101449035208006
snrdtotal59.428717290695
snrdwm82.24195201678641
spacingx0.800000011920929
spacingy0.800000011920929
spacingz0.800000011920929
summarybgk4.502193408113058
summarybgmad7.966136462438623
summarybgmean157.12274169921875
summarybgmedian156.93125915527344
summarybgn8281912.0
summarybgp05143.6993865966797
summarybgp95171.31038589477538
summarybgstdv8.780941009521484
summarycsfk12.496712781750551
summarycsfmad106.7415683174873
summarycsfmean477.9288330078125
summarycsfmedian412.7271728515625
summarycsfn162779.0
summarycsfp05282.7674774169922
summarycsfp951045.322082519533
summarycsfstdv268.629150390625
summarygmk0.6024862893540659
summarygmmad75.97965357323152
summarygmmean760.3470458984375
summarygmmedian755.1231079101562
summarygmn81931.0
summarygmp05633.0800476074219
summarygmp95903.6606750488281
summarygmstdv81.97293090820312
summarywmk16.129914801411942
summarywmmad50.279616447308634
summarywmmean1011.6276245117188
summarywmmedian1000.021728515625
summarywmn426167.0
summarywmp05924.1372192382812
summarywmp951125.6032958984374
summarywmstdv77.87910461425781
tpmoverlapcsf0.09878072887659073
tpmoverlapgm0.36087489128112793
tpmoverlapwm0.4660849869251251
wm2max0.3228642083308623
AcquisitionMatrixPE320
AcquisitionNumber1
AcquisitionTime17:06:50.535000
BaseResolution320
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20200427
DeviceSerialNumber167017
DwellTime6.6e-06
EchoTime0.00314
FlipAngle9
ImageOrientationPatientDICOM[-0.0180503, 0.991097, 0.13191, -0.000682472, 0.131919, -0.99126]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM', 'FM', 'FIL']
ImagingFrequency123.25
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressUniversity_Street_3801_Montreal_District_CA_H3A_2B4
InstitutionNameMc_Connell_Brain_Imaging_Centre
InstitutionalDepartmentNameDepartment
InversionTime0.9
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
ParallelReductionFactorInPlane2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps319
PhaseResolution1
PixelBandwidth235
ProcedureStepDescriptionFunctional_Dr.Bernhardt
ProtocolNamemprage-0.8iso
PulseSequenceDetails%SiemensSeq%_tfl
ReceiveCoilActiveElementsHC1-7
ReceiveCoilNameHeadNeck_64
ReconMatrixPE320
RefLinesPE32
RepetitionTime2.3
SAR0.0444313
ScanOptionsIR
ScanningSequenceGR_IR
SequenceName_tfl3d1_16ns
SequenceVariantSK_SP_MP
SeriesDescriptionmprage-0.8iso
SeriesNumber19
ShimSetting[315, -11637, -6471, 336, -24, -385, 23, 23]
SliceThickness0.8
SoftwareVersionssyngo_MR_E11
StationNameMRC35056
TxRefAmp210.725
md5sumaf2d70a8ec2e5f6ea27f9f2be78c059f
softwaremriqc
version0.15.2
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.