MRIQC: individual T1w report

Summary

  • BIDS filename: sub-HC30_ses-pre_run-2_T1w.
  • Date and time: 2020-07-24, 02:42.
  • MRIQC version: 0.15.2.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.4916551352123322
cnr2.2788289517643174
efc0.6765649792142605
fber23.46297836303711
fwhmavg3.561174946934358
fwhmx3.5597999469548474
fwhmy3.6428624457171193
fwhmz3.4808624481311075
icvscsf0.2121461958097297
icvsgm0.4109120245322419
icvswm0.3769417796580284
inumed1.6215369701385498
inurange0.5812112689018247
qi10.0
qi20.004192406457505428
rpvecsf28.166323304184576
rpvegm14.999999338147648
rpvewm18.880196615717992
sizex224
sizey320
sizez320
snrcsf1.627672546322933
snrgm9.667153820699058
snrtotal8.542797809890827
snrwm14.333567062650486
snrdcsf34.63627339011721
snrdgm63.74502155491146
snrdtotal60.762202530305274
snrdwm83.90531264588714
spacingx0.800000011920929
spacingy0.800000011920929
spacingz0.800000011920929
summarybgk3.844166402768175
summarybgmad7.808229915118538
summarybgmean154.7068328857422
summarybgmedian154.51271057128906
summarybgn8488935.0
summarybgp05141.54827880859375
summarybgp95168.67027740478517
summarybgstdv8.587285995483398
summarycsfk14.18386927939153
summarycsfmad100.52131722508884
summarycsfmean473.806396484375
summarycsfmedian412.8117370605469
summarycsfn112717.0
summarycsfp05291.14717407226567
summarycsfp95882.813842773437
summarycsfstdv253.6197509765625
summarygmk1.0177330288596202
summarygmmad70.75733566355275
summarygmmean767.895263671875
summarygmmedian759.7437744140625
summarygmn61530.0
summarygmp05652.6783447265625
summarygmp95910.6077392578125
summarygmstdv78.58958435058594
summarywmk16.06819671102514
summarywmmad47.377574629225464
summarywmmean1008.88330078125
summarywmmedian1000.0238037109375
summarywmn427507.0
summarywmp05926.6316711425782
summarywmp951109.04755859375
summarywmstdv69.76788330078125
tpmoverlapcsf0.10993775725364685
tpmoverlapgm0.37564578652381897
tpmoverlapwm0.46559250354766846
wm2max0.3297888639966738
AcquisitionMatrixPE320
AcquisitionNumber1
AcquisitionTime16:18:56.927500
BaseResolution320
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20200427
DeviceSerialNumber167017
DwellTime6.6e-06
EchoTime0.00314
FlipAngle9
ImageOrientationPatientDICOM[-0.0180503, 0.991097, 0.13191, -0.000682472, 0.131919, -0.99126]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM', 'FM', 'FIL']
ImagingFrequency123.25
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressUniversity_Street_3801_Montreal_District_CA_H3A_2B4
InstitutionNameMc_Connell_Brain_Imaging_Centre
InstitutionalDepartmentNameDepartment
InversionTime0.9
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
ParallelReductionFactorInPlane2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps319
PhaseResolution1
PixelBandwidth235
ProcedureStepDescriptionFunctional_Dr.Bernhardt
ProtocolNamemprage-0.8iso
PulseSequenceDetails%SiemensSeq%_tfl
ReceiveCoilActiveElementsHC1-7
ReceiveCoilNameHeadNeck_64
ReconMatrixPE320
RefLinesPE32
RepetitionTime2.3
SAR0.0444313
ScanOptionsIR
ScanningSequenceGR_IR
SequenceName_tfl3d1_16ns
SequenceVariantSK_SP_MP
SeriesDescriptionmprage-0.8iso
SeriesNumber7
ShimSetting[315, -11637, -6471, 336, -24, -385, 23, 23]
SliceThickness0.8
SoftwareVersionssyngo_MR_E11
StationNameMRC35056
TxRefAmp210.725
md5sum2822a912df885691fba29619cd253aeb
softwaremriqc
version0.15.2
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.