MRIQC: individual T1w report

Summary

  • BIDS filename: sub-HC31_ses-pre_run-2_T1w.
  • Date and time: 2020-07-24, 13:49.
  • MRIQC version: 0.15.2.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.5254147683072499
cnr2.302661541485324
efc0.6875817276776555
fber42.014183044433594
fwhmavg3.4583791151328023
fwhmx3.4872874480353673
fwhmy3.505049947770686
fwhmz3.382799949592353
icvscsf0.21026903210469836
icvsgm0.42537931950260344
icvswm0.3643516483926982
inumed1.359311580657959
inurange0.6231591939926147
qi10.0
qi20.0045931248382965065
rpvecsf20.98608359066043
rpvegm10.831541235837088
rpvewm14.238441244269925
sizex224
sizey320
sizez320
snrcsf1.729459803713889
snrgm9.071096816834197
snrtotal9.045573437332456
snrwm16.33616369144928
snrdcsf49.79167274157342
snrdgm84.14677335785865
snrdtotal81.53713155349129
snrdwm110.67294856104182
spacingx0.800000011920929
spacingy0.800000011920929
spacingz0.800000011920929
summarybgk2206.57019685344
summarybgmad5.919742264128222
summarybgmean121.1622543334961
summarybgmedian121.148193359375
summarybgn7553895.0
summarybgp05111.45687103271484
summarybgp95131.64783172607423
summarybgstdv7.871518135070801
summarycsfk17.638074478627765
summarycsfmad109.30087601065654
summarycsfmean500.71826171875
summarycsfmedian449.9122314453125
summarycsfn139453.0
summarycsfp05311.4277770996094
summarycsfp95804.2896606445308
summarycsfstdv260.1451721191406
summarygmk1.0054376482071614
summarygmmad71.24458368879344
summarygmmean772.489013671875
summarygmmedian760.3412475585938
summarygmn87650.0
summarygmp05656.0088073730469
summarygmp95934.8853424072265
summarygmstdv83.81973266601562
summarywmk1.4779646291533037
summarywmmad54.69086479616795
summarywmmean1004.3795776367188
summarywmmedian1000.0289306640625
summarywmn528408.0
summarywmp05912.7661590576172
summarywmp951111.3784362792967
summarywmstdv61.21559524536133
tpmoverlapcsf0.10276860743761063
tpmoverlapgm0.3590635061264038
tpmoverlapwm0.44842803478240967
wm2max0.3742606252612657
AcquisitionMatrixPE320
AcquisitionNumber1
AcquisitionTime16:44:19.972500
BaseResolution320
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20200427
DeviceSerialNumber167017
DwellTime6.6e-06
EchoTime0.00314
FlipAngle9
ImageOrientationPatientDICOM[0.045875, 0.997692, -0.0500627, 0.0148361, -0.0507904, -0.998599]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM', 'FM', 'FIL']
ImagingFrequency123.25
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressUniversity_Street_3801_Montreal_District_CA_H3A_2B4
InstitutionNameMc_Connell_Brain_Imaging_Centre
InstitutionalDepartmentNameDepartment
InversionTime0.9
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
ParallelReductionFactorInPlane2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps319
PhaseResolution1
PixelBandwidth235
ProcedureStepDescriptionFunctional_Dr.Bernhardt
ProtocolNamemprage-0.8iso
PulseSequenceDetails%SiemensSeq%_tfl
ReceiveCoilActiveElementsHC1-7
ReceiveCoilNameHeadNeck_64
ReconMatrixPE320
RefLinesPE32
RepetitionTime2.3
SAR0.0640237
ScanOptionsIR
ScanningSequenceGR_IR
SequenceName_tfl3d1_16ns
SequenceVariantSK_SP_MP
SeriesDescriptionmprage-0.8iso
SeriesNumber7
ShimSetting[315, -11623, -6418, 230, -67, -386, 74, 15]
SliceThickness0.8
SoftwareVersionssyngo_MR_E11
StationNameMRC35056
TxRefAmp277.888
md5sumedd5b374d3b6486042a2f0c9af39f44d
softwaremriqc
version0.15.2
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.