MRIQC: individual T1w report

Summary

  • BIDS filename: sub-HC32_ses-pre_run-1_T1w.
  • Date and time: 2020-07-24, 15:29.
  • MRIQC version: 0.15.2.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.5239518751825666
cnr2.2791649775004994
efc0.6874384630268943
fber38.6960334777832
fwhmavg3.2691666179522882
fwhmx3.248087451599725
fwhmy3.289637450980582
fwhmz3.269774951276556
icvscsf0.2078398698565553
icvsgm0.41686408121398794
icvswm0.3752960489294567
inumed1.4700473546981812
inurange0.6267845690250395
qi10.0
qi20.0048515566010057555
rpvecsf22.4452308795769
rpvegm11.454482613576184
rpvewm14.494392687687611
sizex224
sizey320
sizez320
snrcsf1.1703635861059978
snrgm8.60367774275783
snrtotal9.408981998142261
snrwm18.452904665562954
snrdcsf47.084256420172345
snrdgm77.75008226510772
snrdtotal75.60338841132646
snrdwm101.97582654869933
spacingx0.800000011920929
spacingy0.800000011920929
spacingz0.800000011920929
summarybgk2969.721938235514
summarybgmad6.424703874834758
summarybgmean126.00843048095703
summarybgmedian125.89876556396484
summarybgn7653959.0
summarybgp05115.1251220703125
summarybgp95137.5165557861328
summarybgstdv8.643818855285645
summarycsfk4.394734050945196
summarycsfmad130.38850361024586
summarycsfmean596.4588012695312
summarycsfmedian461.7395935058594
summarycsfn156179.0
summarycsfp05311.7158264160156
summarycsfp951645.506921386719
summarycsfstdv394.5253601074219
summarygmk1.1917179798291277
summarygmmad76.22108318254382
summarygmmean774.0468139648438
summarygmmedian762.4691162109375
summarygmn103373.0
summarygmp05650.2894409179687
summarygmp95942.6525756835938
summarygmstdv88.6208724975586
summarywmk1.7026152664580323
summarywmmad48.256150370159965
summarywmmean1003.3425903320312
summarywmmedian1000.0429077148438
summarywmn550475.0
summarywmp05921.1600463867187
summarywmp951095.87587890625
summarywmstdv54.19428634643555
tpmoverlapcsf0.10334061086177826
tpmoverlapgm0.36860278248786926
tpmoverlapwm0.4708961248397827
wm2max0.3844465612616113
AcquisitionMatrixPE320
AcquisitionNumber1
AcquisitionTime14:14:53.087500
BaseResolution320
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20200427
DeviceSerialNumber167017
DwellTime6.6e-06
EchoTime0.00314
FlipAngle9
ImageOrientationPatientDICOM[0.0165231, 0.991357, 0.130148, -0.0202337, 0.130471, -0.991246]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM', 'FM', 'FIL']
ImagingFrequency123.25
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressUniversity_Street_3801_Montreal_District_CA_H3A_2B4
InstitutionNameMc_Connell_Brain_Imaging_Centre
InstitutionalDepartmentNameDepartment
InversionTime0.9
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
ParallelReductionFactorInPlane2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps319
PhaseResolution1
PixelBandwidth235
ProcedureStepDescriptionFunctional_Dr.Bernhardt
ProtocolNamemprage-0.8iso
PulseSequenceDetails%SiemensSeq%_tfl
ReceiveCoilActiveElementsHC1-7
ReceiveCoilNameHeadNeck_64
ReconMatrixPE320
RefLinesPE32
RepetitionTime2.3
SAR0.0519685
ScanOptionsIR
ScanningSequenceGR_IR
SequenceName_tfl3d1_16ns
SequenceVariantSK_SP_MP
SeriesDescriptionmprage-0.8iso
SeriesNumber19
ShimSetting[320, -11605, -6421, 411, 48, -230, -24, 2]
SliceThickness0.8
SoftwareVersionssyngo_MR_E11
StationNameMRC35056
TxRefAmp235.22
md5sum59dde18f6da743bd5644a198c4cd725a
softwaremriqc
version0.15.2
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.