MRIQC: individual T1w report

Summary

  • BIDS filename: sub-HC32_ses-pre_run-2_T1w.
  • Date and time: 2020-07-24, 15:10.
  • MRIQC version: 0.15.2.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.5067784877553686
cnr2.311721472882278
efc0.6794762304899756
fber40.873775482177734
fwhmavg3.189483285806329
fwhmx3.1776624526491393
fwhmy3.2056499522320934
fwhmz3.185137452537753
icvscsf0.19018093679915407
icvsgm0.42354714140129707
icvswm0.38627192179954883
inumed1.45027756690979
inurange0.577480745315551
qi10.0
qi20.005320010011693458
rpvecsf25.012537340951145
rpvegm11.744285033221539
rpvewm14.681741785258273
sizex224
sizey320
sizez320
snrcsf1.073497403637679
snrgm8.586250111414437
snrtotal9.799527014272163
snrwm19.738833527764378
snrdcsf48.140619301061605
snrdgm80.38043583464422
snrdtotal77.9603119335997
snrdwm105.35988066509323
spacingx0.800000011920929
spacingy0.800000011920929
spacingz0.800000011920929
summarybgk15.926900934053815
summarybgmad6.218305538950116
summarybgmean123.05733489990234
summarybgmedian123.04495239257812
summarybgn7668759.0
summarybgp05112.5595474243164
summarybgp95134.1745162963867
summarybgstdv7.544198513031006
summarycsfk2.721154227253999
summarycsfmad122.41055809083
summarycsfmean621.966064453125
summarycsfmedian456.9324645996094
summarycsfn119933.0
summarycsfp05312.46149291992185
summarycsfp951677.6203124999995
summarycsfstdv425.6466369628906
summarygmk0.8597762055455003
summarygmmad75.60447847570195
summarygmmean776.8294067382812
summarygmmedian762.9405517578125
summarygmn108849.0
summarygmp05654.9916748046875
summarygmp95950.6056152343749
summarygmstdv88.85567474365234
summarywmk1.7872310169254648
summarywmmad44.55036875076046
summarywmmean1002.3121948242188
summarywmmedian1000.0359497070312
summarywmn548667.0
summarywmp05923.9050231933593
summarywmp951087.5152709960937
summarywmstdv50.663330078125
tpmoverlapcsf0.11243672668933868
tpmoverlapgm0.37390780448913574
tpmoverlapwm0.4714645445346832
wm2max0.3726764032191063
AcquisitionMatrixPE320
AcquisitionNumber1
AcquisitionTime13:26:21.842500
BaseResolution320
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20200427
DeviceSerialNumber167017
DwellTime6.6e-06
EchoTime0.00314
FlipAngle9
ImageOrientationPatientDICOM[0.0165231, 0.991357, 0.130148, -0.0202337, 0.130471, -0.991246]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM', 'FM', 'FIL']
ImagingFrequency123.25
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressUniversity_Street_3801_Montreal_District_CA_H3A_2B4
InstitutionNameMc_Connell_Brain_Imaging_Centre
InstitutionalDepartmentNameDepartment
InversionTime0.9
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
ParallelReductionFactorInPlane2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps319
PhaseResolution1
PixelBandwidth235
ProcedureStepDescriptionFunctional_Dr.Bernhardt
ProtocolNamemprage-0.8iso
PulseSequenceDetails%SiemensSeq%_tfl
ReceiveCoilActiveElementsHC1-7
ReceiveCoilNameHeadNeck_64
ReconMatrixPE320
RefLinesPE32
RepetitionTime2.3
SAR0.0519685
ScanOptionsIR
ScanningSequenceGR_IR
SequenceName_tfl3d1_16ns
SequenceVariantSK_SP_MP
SeriesDescriptionmprage-0.8iso
SeriesNumber7
ShimSetting[320, -11605, -6421, 411, 48, -230, -24, 2]
SliceThickness0.8
SoftwareVersionssyngo_MR_E11
StationNameMRC35056
TxRefAmp235.22
md5sum6f37e57b34da2cc3527c7acff29713ab
softwaremriqc
version0.15.2
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.