MRIQC: individual T1w report

Summary

  • BIDS filename: sub-HC34_ses-pre_run-1_T1w.
  • Date and time: 2020-07-24, 18:15.
  • MRIQC version: 0.15.2.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.8011071046254669
cnr1.4556558358343221
efc0.7094871189610706
fber22.835895538330078
fwhmavg3.5546291136985655
fwhmx3.473949948234112
fwhmy3.6468124456582602
fwhmz3.543124947203324
icvscsf0.2262366630001631
icvsgm0.4348547833721953
icvswm0.3389085536276416
inumed1.5106397867202759
inurange0.8296920776367185
qi10.0
qi20.003595462770299889
rpvecsf21.04898717198525
rpvegm11.364601672894889
rpvewm16.183198052409743
sizex224
sizey320
sizez320
snrcsf1.2706197459961988
snrgm7.807503439845842
snrtotal7.0887592596544975
snrwm12.188154593121453
snrdcsf36.68804637670838
snrdgm65.15699961416823
snrdtotal60.9211013445457
snrdwm80.91825804276048
spacingx0.800000011920929
spacingy0.800000011920929
spacingz0.800000011920929
summarybgk6141.803843222376
summarybgmad8.09653378890753
summarybgmean166.87889099121094
summarybgmedian166.47434997558594
summarybgn8700438.0
summarybgp05153.17364273071288
summarybgp95180.7503662109375
summarybgstdv23.16618537902832
summarycsfk9.7200850040193
summarycsfmad115.8716660644769
summarycsfmean553.7783203125
summarycsfmedian453.41094970703125
summarycsfn156010.0
summarycsfp05307.2362365722656
summarycsfp951477.9592468261685
summarycsfstdv356.8412170410156
summarygmk0.1349184189392929
summarygmmad100.12727478365312
summarygmmean820.4867553710938
summarygmmedian805.245849609375
summarygmn126590.0
summarygmp05675.0660888671875
summarygmp951010.1912658691406
summarygmstdv103.13702392578125
summarywmk20.11618205318844
summarywmmad55.91737788635502
summarywmmean1009.718505859375
summarywmmedian1000.0321044921875
summarywmn476189.0
summarywmp05912.5954833984375
summarywmp951126.7517333984374
summarywmstdv82.04942321777344
tpmoverlapcsf0.10053320974111557
tpmoverlapgm0.36299699544906616
tpmoverlapwm0.48097315430641174
wm2max0.3525271081482444
AcquisitionMatrixPE320
AcquisitionNumber1
AcquisitionTime13:21:19.045000
BaseResolution320
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20200427
DeviceSerialNumber167017
DwellTime6.6e-06
EchoTime0.00314
FlipAngle9
ImageOrientationPatientDICOM[0.0144362, 0.994881, 0.100014, 0.000428703, 0.100019, -0.994985]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM', 'FM', 'FIL']
ImagingFrequency123.25
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressUniversity_Street_3801_Montreal_District_CA_H3A_2B4
InstitutionNameMc_Connell_Brain_Imaging_Centre
InstitutionalDepartmentNameDepartment
InversionTime0.9
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
ParallelReductionFactorInPlane2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps319
PhaseResolution1
PixelBandwidth235
ProcedureStepDescriptionFunctional_Dr.Bernhardt
ProtocolNamemprage-0.8iso_sess2
PulseSequenceDetails%SiemensSeq%_tfl
ReceiveCoilActiveElementsHC1-7
ReceiveCoilNameHeadNeck_64
ReconMatrixPE320
RefLinesPE32
RepetitionTime2.3
SAR0.0498764
ScanOptionsIR
ScanningSequenceGR_IR
SequenceName_tfl3d1_16ns
SequenceVariantSK_SP_MP
SeriesDescriptionmprage-0.8iso_sess2
SeriesNumber24
ShimSetting[320, -11609, -6471, 413, -6, -299, -19, 13]
SliceThickness0.8
SoftwareVersionssyngo_MR_E11
StationNameMRC35056
TxRefAmp225.124
md5suma0307512897444e9badc837471b13225
softwaremriqc
version0.15.2
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.