MRIQC: individual T1w report

Summary

  • BIDS filename: sub-HC34_ses-pre_run-2_T1w.
  • Date and time: 2020-07-24, 17:56.
  • MRIQC version: 0.15.2.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.7464162438112143
cnr1.6161823089764213
efc0.7187058166530871
fber22.128868103027344
fwhmavg3.6116541128488264
fwhmx3.5199374475488447
fwhmy3.7053374447861693
fwhmz3.6096874462114656
icvscsf0.21885163067813157
icvsgm0.4349573274305933
icvswm0.34619104189127514
inumed1.581830382347107
inurange0.829158616065979
qi10.0
qi20.003927125828635783
rpvecsf22.168746769862366
rpvegm11.653151309243325
rpvewm16.218053010070147
sizex224
sizey320
sizez320
snrcsf1.2829554300579045
snrgm8.173658073628255
snrtotal7.952163936305646
snrwm14.399878305230779
snrdcsf37.163878987997045
snrdgm64.87744744521584
snrdtotal60.99164920013052
snrdwm80.93362116717866
spacingx0.800000011920929
spacingy0.800000011920929
spacingz0.800000011920929
summarybgk6906.901038403058
summarybgmad8.095006755677716
summarybgmean169.67723083496094
summarybgmedian169.23104858398438
summarybgn8554926.0
summarybgp05156.12225723266602
summarybgp95183.37057495117188
summarybgstdv25.037933349609375
summarycsfk7.443547048416978
summarycsfmad120.49830527824086
summarycsfmean563.52880859375
summarycsfmedian459.2049255371094
summarycsfn147865.0
summarycsfp05311.34339599609376
summarycsfp951525.9715820312485
summarycsfstdv357.92620849609375
summarygmk0.22146740414223576
summarygmmad94.81681877822092
summarygmmean814.6286010742188
summarygmmedian801.6397705078125
summarygmn131778.0
summarygmp05675.2308593749999
summarygmp95995.4072113037109
summarygmstdv98.07563781738281
summarywmk9.851416317721322
summarywmmad53.26735310797754
summarywmmean1007.6140747070312
summarywmmedian1000.0333251953125
summarywmn480000.0
summarywmp05916.805288696289
summarywmp951117.3235229492188
summarywmstdv69.44727325439453
tpmoverlapcsf0.1065334603190422
tpmoverlapgm0.37434521317481995
tpmoverlapwm0.48229262232780457
wm2max0.37476184038253124
AcquisitionMatrixPE320
AcquisitionNumber1
AcquisitionTime12:20:18.015000
BaseResolution320
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20200427
DeviceSerialNumber167017
DwellTime6.6e-06
EchoTime0.00314
FlipAngle9
ImageOrientationPatientDICOM[-0.024823, 0.997082, 0.0721859, 0.013024, 0.0725246, -0.997282]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM', 'FM', 'FIL']
ImagingFrequency123.25
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressUniversity_Street_3801_Montreal_District_CA_H3A_2B4
InstitutionNameMc_Connell_Brain_Imaging_Centre
InstitutionalDepartmentNameDepartment
InversionTime0.9
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
ParallelReductionFactorInPlane2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps319
PhaseResolution1
PixelBandwidth235
ProcedureStepDescriptionFunctional_Dr.Bernhardt
ProtocolNamemprage-0.8iso
PulseSequenceDetails%SiemensSeq%_tfl
ReceiveCoilActiveElementsHC1-7
ReceiveCoilNameHeadNeck_64
ReconMatrixPE320
RefLinesPE32
RepetitionTime2.3
SAR0.0469636
ScanOptionsIR
ScanningSequenceGR_IR
SequenceName_tfl3d1_16ns
SequenceVariantSK_SP_MP
SeriesDescriptionmprage-0.8iso
SeriesNumber7
ShimSetting[339, -11536, -6468, 859, 3, -140, -599, -104]
SliceThickness0.8
SoftwareVersionssyngo_MR_E11
StationNameMRC35056
TxRefAmp220.09
md5sumbc8ef90e39248341a6b82a82338fbd5e
softwaremriqc
version0.15.2
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.