MRIQC: individual T1w report

Summary

  • BIDS filename: sub-HC35_ses-pre_run-1_T1w.
  • Date and time: 2020-07-24, 22:24.
  • MRIQC version: 0.15.2.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.6147393183886118
cnr2.0070109880905576
efc0.6848100836413957
fber34.98284149169922
fwhmavg3.2181124520463875
fwhmx3.2093249521773317
fwhmy3.248724951590226
fwhmz3.196287452371606
icvscsf0.20615634172062486
icvsgm0.4241789528672238
icvswm0.36966470541215135
inumed1.459606409072876
inurange0.6211966276168823
qi10.0
qi20.003716069346794894
rpvecsf23.70329836064892
rpvegm11.930365541872401
rpvewm15.484643052245666
sizex224
sizey320
sizez320
snrcsf1.22635305775279
snrgm8.77484309451979
snrtotal8.70131737004685
snrwm16.10275595786797
snrdcsf45.2421899930488
snrdgm76.47153571721248
snrdtotal73.188343085831
snrdwm97.85130354723171
spacingx0.800000011920929
spacingy0.800000011920929
spacingz0.800000011920929
summarybgk24.844230437935387
summarybgmad6.695441210802253
summarybgmean135.41427612304688
summarybgmedian135.42617797851562
summarybgn7986543.0
summarybgp05124.35810852050781
summarybgp95147.09779357910156
summarybgstdv7.934026718139648
summarycsfk6.128289511436311
summarycsfmad113.58484896765012
summarycsfmean576.723876953125
summarycsfmedian462.3715515136719
summarycsfn134564.0
summarycsfp05318.2244338989258
summarycsfp951634.8091308593748
summarycsfstdv377.0283203125
summarygmk0.6312218361758211
summarygmmad79.73348583826251
summarygmmean795.73876953125
summarygmmedian781.532958984375
summarygmn92704.0
summarygmp05672.3235473632812
summarygmp95963.3162780761718
summarygmstdv89.064697265625
summarywmk2.9387337724899316
summarywmmad54.58675506396637
summarywmmean1004.6575317382812
summarywmmedian1000.032470703125
summarywmn510202.0
summarywmp05913.4255035400391
summarywmp951109.7435241699216
summarywmstdv62.103126525878906
tpmoverlapcsf0.11076795309782028
tpmoverlapgm0.36121052503585815
tpmoverlapwm0.4632849395275116
wm2max0.33699957741271125
AcquisitionMatrixPE320
AcquisitionNumber1
AcquisitionTime17:06:27.592500
BaseResolution320
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20200427
DeviceSerialNumber167017
DwellTime6.6e-06
EchoTime0.00314
FlipAngle9
ImageOrientationPatientDICOM[-0.0328092, 0.994251, 0.101924, 0.00021937, 0.101986, -0.994786]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM', 'FM', 'FIL']
ImagingFrequency123.25
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressUniversity_Street_3801_Montreal_District_CA_H3A_2B4
InstitutionNameMc_Connell_Brain_Imaging_Centre
InstitutionalDepartmentNameDepartment
InversionTime0.9
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
ParallelReductionFactorInPlane2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps319
PhaseResolution1
PixelBandwidth235
ProcedureStepDescriptionFunctional_Dr.Bernhardt
ProtocolNamemprage-0.8iso
PulseSequenceDetails%SiemensSeq%_tfl
ReceiveCoilActiveElementsHC1-7
ReceiveCoilNameHeadNeck_64
ReconMatrixPE320
RefLinesPE32
RepetitionTime2.3
SAR0.0491066
ScanOptionsIR
ScanningSequenceGR_IR
SequenceName_tfl3d1_16ns
SequenceVariantSK_SP_MP
SeriesDescriptionmprage-0.8iso
SeriesNumber19
ShimSetting[330, -11565, -6466, 479, 44, -235, 37, 18]
SliceThickness0.8
SoftwareVersionssyngo_MR_E11
StationNameMRC35056
TxRefAmp236.969
md5sum34e576653423788a759fc64c71e2ad30
softwaremriqc
version0.15.2
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.