MRIQC: individual T1w report

Summary

  • BIDS filename: sub-HC35_ses-pre_run-2_T1w.
  • Date and time: 2020-07-24, 22:05.
  • MRIQC version: 0.15.2.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.5783320143759488
cnr2.1291583642972376
efc0.6760237304648107
fber37.588340759277344
fwhmavg3.187904119163193
fwhmx3.1729374527195473
fwhmy3.2186749520380054
fwhmz3.1720999527320273
icvscsf0.2001589627009125
icvsgm0.4243488233132459
icvswm0.3754922139858416
inumed1.4535186290740967
inurange0.5977699398994445
qi10.0
qi20.0037144400094534283
rpvecsf24.80380905952009
rpvegm12.193511982331275
rpvewm15.639926895964162
sizex224
sizey320
sizez320
snrcsf1.163382516550144
snrgm9.105436732204119
snrtotal9.103126374765607
snrwm17.040559875542556
snrdcsf47.03269811522193
snrdgm79.52702305038535
snrdtotal76.23383227260352
snrdwm102.14177565220328
spacingx0.800000011920929
spacingy0.800000011920929
spacingz0.800000011920929
summarybgk23.301007453041883
summarybgmad6.414195623942182
summarybgmean130.9560089111328
summarybgmedian130.9642333984375
summarybgn8201849.0
summarybgp05120.37840270996094
summarybgp95142.16053771972656
summarybgstdv7.6130523681640625
summarycsfk5.239282923634088
summarycsfmad106.38317927412845
summarycsfmean591.7412109375
summarycsfmedian460.4795837402344
summarycsfn114845.0
summarycsfp05317.25
summarycsfp951665.79775390625
summarycsfstdv395.80926513671875
summarygmk0.4594133033003738
summarygmmad76.5621432265836
summarygmmean792.26025390625
summarygmmedian778.619384765625
summarygmn89089.0
summarygmp05673.2675048828125
summarygmp95953.3702514648437
summarygmstdv85.51100158691406
summarywmk2.7651625397100776
summarywmmad51.487850384166954
summarywmmean1003.4978637695312
summarywmmedian1000.031982421875
summarywmn509015.0
summarywmp05915.310870361328
summarywmp951101.1300048828125
summarywmstdv58.68533706665039
tpmoverlapcsf0.11717373132705688
tpmoverlapgm0.37009209394454956
tpmoverlapwm0.4694303274154663
wm2max0.3354892119787936
AcquisitionMatrixPE320
AcquisitionNumber1
AcquisitionTime16:18:31.997500
BaseResolution320
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20200427
DeviceSerialNumber167017
DwellTime6.6e-06
EchoTime0.00314
FlipAngle9
ImageOrientationPatientDICOM[-0.0328092, 0.994251, 0.101924, 0.00021937, 0.101986, -0.994786]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM', 'FM', 'FIL']
ImagingFrequency123.25
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressUniversity_Street_3801_Montreal_District_CA_H3A_2B4
InstitutionNameMc_Connell_Brain_Imaging_Centre
InstitutionalDepartmentNameDepartment
InversionTime0.9
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
ParallelReductionFactorInPlane2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps319
PhaseResolution1
PixelBandwidth235
ProcedureStepDescriptionFunctional_Dr.Bernhardt
ProtocolNamemprage-0.8iso
PulseSequenceDetails%SiemensSeq%_tfl
ReceiveCoilActiveElementsHC1-7
ReceiveCoilNameHeadNeck_64
ReconMatrixPE320
RefLinesPE32
RepetitionTime2.3
SAR0.0491066
ScanOptionsIR
ScanningSequenceGR_IR
SequenceName_tfl3d1_16ns
SequenceVariantSK_SP_MP
SeriesDescriptionmprage-0.8iso
SeriesNumber7
ShimSetting[330, -11565, -6466, 479, 44, -235, 37, 18]
SliceThickness0.8
SoftwareVersionssyngo_MR_E11
StationNameMRC35056
TxRefAmp236.969
md5sum7216e6692680295f6d4e7825e74896b3
softwaremriqc
version0.15.2
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.