MRIQC: individual T1w report

Summary

  • BIDS filename: sub-HC36_ses-pre_run-1_T1w.
  • Date and time: 2020-07-24, 23:46.
  • MRIQC version: 0.15.2.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.736315608881981
cnr1.6680320730738647
efc0.7233701710401838
fber25.085742950439453
fwhmavg3.5561707803422595
fwhmx3.540187447247096
fwhmy3.6465499456621715
fwhmz3.48177494811751
icvscsf0.2191216596045614
icvsgm0.4344048943486134
icvswm0.34647344604682523
inumed1.4458926916122437
inurange0.7778940439224238
qi10.0
qi20.004588130091294114
rpvecsf20.930857659151467
rpvegm10.914316855830384
rpvewm14.984394083322025
sizex224
sizey320
sizez320
snrcsf2.675749457263266
snrgm8.135239743100923
snrtotal8.308747987911602
snrwm14.115254763370615
snrdcsf38.25254826284964
snrdgm68.56563927534447
snrdtotal64.35826828166125
snrdwm86.25661730678966
spacingx0.800000011920929
spacingy0.800000011920929
spacingz0.800000011920929
summarybgk6185.099393623188
summarybgmad7.595463285097707
summarybgmean158.60125732421875
summarybgmedian158.3491668701172
summarybgn8392688.0
summarybgp05145.68636093139648
summarybgp95171.39658050537108
summarybgstdv23.497934341430664
summarycsfk37.245255327979045
summarycsfmad94.42499336280775
summarycsfmean469.6289978027344
summarycsfmedian443.48907470703125
summarycsfn184890.0
summarycsfp05321.6206909179688
summarycsfp95654.1714385986328
summarycsfstdv165.74342346191406
summarygmk0.06552074711654798
summarygmmad94.380879069502
summarygmmean810.3179931640625
summarygmmedian794.9303588867188
summarygmn132077.0
summarygmp05673.8657348632812
summarygmp95990.9909423828124
summarygmstdv97.71406555175781
summarywmk8.740398727435027
summarywmmad56.64049033313714
summarywmmean1006.191162109375
summarywmmedian1000.0344848632812
summarywmn493274.0
summarywmp05909.0791778564453
summarywmp951117.960546875
summarywmstdv70.84770965576172
tpmoverlapcsf0.09396138042211533
tpmoverlapgm0.36601653695106506
tpmoverlapwm0.4554022550582886
wm2max0.3910790420152571
AcquisitionMatrixPE320
AcquisitionNumber1
AcquisitionTime09:58:32.310000
BaseResolution320
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20200427
DeviceSerialNumber167017
DwellTime6.6e-06
EchoTime0.00314
FlipAngle9
ImageOrientationPatientDICOM[0.0154401, 0.986165, 0.165045, -0.00311522, 0.165111, -0.98627]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM', 'FM', 'FIL']
ImagingFrequency123.25
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressUniversity_Street_3801_Montreal_District_CA_H3A_2B4
InstitutionNameMc_Connell_Brain_Imaging_Centre
InstitutionalDepartmentNameDepartment
InversionTime0.9
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
ParallelReductionFactorInPlane2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps319
PhaseResolution1
PixelBandwidth235
ProcedureStepDescriptionFunctional_Dr.Bernhardt
ProtocolNamemprage-0.8iso
PulseSequenceDetails%SiemensSeq%_tfl
ReceiveCoilActiveElementsHC1-7
ReceiveCoilNameHeadNeck_64
ReconMatrixPE320
RefLinesPE32
RepetitionTime2.3
SAR0.0399787
ScanOptionsIR
ScanningSequenceGR_IR
SequenceName_tfl3d1_16ns
SequenceVariantSK_SP_MP
SeriesDescriptionmprage-0.8iso
SeriesNumber19
ShimSetting[320, -11577, -6476, 501, 81, -188, -16, 7]
SliceThickness0.8
SoftwareVersionssyngo_MR_E11
StationNameMRC35056
TxRefAmp221.892
md5sum8d046ef19ee08ffe9ffe544cba7cbb19
softwaremriqc
version0.15.2
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.