MRIQC: individual T1w report

Summary

  • BIDS filename: sub-HC36_ses-pre_run-2_T1w.
  • Date and time: 2020-07-24, 23:27.
  • MRIQC version: 0.15.2.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.7152454990552718
cnr1.7069797483540454
efc0.7159287827475344
fber27.84757423400879
fwhmavg3.4795124481512243
fwhmx3.461412448420935
fwhmy3.5875749465409674
fwhmz3.38954994949177
icvscsf0.20840003021973139
icvsgm0.43962199722117457
icvswm0.3519779725590941
inumed1.451514482498169
inurange0.7009169518947602
qi10.0
qi20.0050190022282337555
rpvecsf22.156205039907782
rpvegm11.032327868212134
rpvewm15.08658008370909
sizex224
sizey320
sizez320
snrcsf2.5415040737141017
snrgm8.06164964247709
snrtotal8.553502299180238
snrwm15.057353181349523
snrdcsf39.00513409453997
snrdgm72.69770373195308
snrdtotal67.78553948797774
snrdwm91.65378063744016
spacingx0.800000011920929
spacingy0.800000011920929
spacingz0.800000011920929
summarybgk6400.762092828639
summarybgmad7.148155662334615
summarybgmean150.0554656982422
summarybgmedian149.74542236328125
summarybgn8242378.0
summarybgp05137.93539428710938
summarybgp95162.04300155639646
summarybgstdv24.28020668029785
summarycsfk35.06323664119311
summarycsfmad83.807881967982
summarycsfmean455.2860107421875
summarycsfmedian425.5827941894531
summarycsfn162019.0
summarycsfp05318.6146575927734
summarycsfp95643.6256835937501
summarycsfstdv167.45260620117188
summarygmk0.06797546381821462
summarygmmad94.1003121640774
summarygmmean810.2212524414062
summarygmmedian793.2005004882812
summarygmn132730.0
summarygmp05675.0716033935547
summarygmp95994.1138000488281
summarygmstdv98.39146423339844
summarywmk7.217574643215896
summarywmmad53.83296621630086
summarywmmean1005.6646118164062
summarywmmedian1000.0291748046875
summarywmn488696.0
summarywmp05912.4885559082031
summarywmp951113.1878967285156
summarywmstdv66.41460418701172
tpmoverlapcsf0.1034015417098999
tpmoverlapgm0.37348467111587524
tpmoverlapwm0.4595857858657837
wm2max0.4029142171982257
AcquisitionMatrixPE320
AcquisitionNumber1
AcquisitionTime09:09:11.617500
BaseResolution320
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20200427
DeviceSerialNumber167017
DwellTime6.6e-06
EchoTime0.00314
FlipAngle9
ImageOrientationPatientDICOM[0.0154401, 0.986165, 0.165045, -0.00311522, 0.165111, -0.98627]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM', 'FM', 'FIL']
ImagingFrequency123.25
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressUniversity_Street_3801_Montreal_District_CA_H3A_2B4
InstitutionNameMc_Connell_Brain_Imaging_Centre
InstitutionalDepartmentNameDepartment
InversionTime0.9
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
ParallelReductionFactorInPlane2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps319
PhaseResolution1
PixelBandwidth235
ProcedureStepDescriptionFunctional_Dr.Bernhardt
ProtocolNamemprage-0.8iso
PulseSequenceDetails%SiemensSeq%_tfl
ReceiveCoilActiveElementsHC1-7
ReceiveCoilNameHeadNeck_64
ReconMatrixPE320
RefLinesPE32
RepetitionTime2.3
SAR0.0399787
ScanOptionsIR
ScanningSequenceGR_IR
SequenceName_tfl3d1_16ns
SequenceVariantSK_SP_MP
SeriesDescriptionmprage-0.8iso
SeriesNumber7
ShimSetting[320, -11577, -6476, 501, 81, -188, -16, 7]
SliceThickness0.8
SoftwareVersionssyngo_MR_E11
StationNameMRC35056
TxRefAmp221.892
md5sumeb81155b2a13b3552d2a1e1f6a721c19
softwaremriqc
version0.15.2
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.