MRIQC: individual T1w report

Summary

  • BIDS filename: sub-HC37_ses-pre_run-1_T1w.
  • Date and time: 2020-07-25, 01:09.
  • MRIQC version: 0.15.2.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.6415733093572004
cnr1.8555710867949435
efc0.6813580167307276
fber26.00704002380371
fwhmavg3.4384166154302664
fwhmx3.4572249484833337
fwhmy3.4938249479379513
fwhmz3.3641999498695143
icvscsf0.2233559323095104
icvsgm0.4254347504585795
icvswm0.3512093172319101
inumed1.4993085861206055
inurange0.6432921409606933
qi10.0
qi20.004415874614753397
rpvecsf21.844261155601746
rpvegm11.789695866714197
rpvewm16.00714995286093
sizex224
sizey320
sizez320
snrcsf1.365507501429948
snrgm9.03292771513351
snrtotal8.342309403178097
snrwm14.628492992970836
snrdcsf37.78113204930022
snrdgm71.2985758057585
snrdtotal66.33983230123776
snrdwm89.93978904865457
spacingx0.800000011920929
spacingy0.800000011920929
spacingz0.800000011920929
summarybgk14483.8605838907
summarybgmad7.284378337791333
summarybgmean152.42857360839844
summarybgmedian152.25955200195312
summarybgn8162664.0
summarybgp05140.38758850097656
summarybgp95164.93365249633788
summarybgstdv10.073451042175293
summarycsfk11.452522766239824
summarycsfmad81.07103121129299
summarycsfmean503.1280822753906
summarycsfmedian420.0836181640625
summarycsfn187419.0
summarycsfp05307.9609008789063
summarycsfp951338.594055175782
summarycsfstdv307.63836669921875
summarygmk0.11330850926294866
summarygmmad85.68516006392974
summarygmmean801.016357421875
summarygmmedian792.7598266601562
summarygmn121483.0
summarygmp05670.903973388672
summarygmp95958.5507080078124
summarygmstdv87.76296997070312
summarywmk21.194092475174024
summarywmmad47.293282394939695
summarywmmean1007.3408813476562
summarywmmedian1000.0291137695312
summarywmn503228.0
summarywmp05924.8027648925781
summarywmp951102.7544982910154
summarywmstdv68.36166381835938
tpmoverlapcsf0.10681384056806564
tpmoverlapgm0.34432128071784973
tpmoverlapwm0.46539026498794556
wm2max0.3363092417546625
AcquisitionMatrixPE320
AcquisitionNumber1
AcquisitionTime10:00:17.167500
BaseResolution320
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20200427
DeviceSerialNumber167017
DwellTime6.6e-06
EchoTime0.00314
FlipAngle9
ImageOrientationPatientDICOM[-0.011509, 0.934607, 0.355496, -0.0298355, 0.35504, -0.934375]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM', 'FM', 'FIL']
ImagingFrequency123.25
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressUniversity_Street_3801_Montreal_District_CA_H3A_2B4
InstitutionNameMc_Connell_Brain_Imaging_Centre
InstitutionalDepartmentNameDepartment
InversionTime0.9
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
ParallelReductionFactorInPlane2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps319
PhaseResolution1
PixelBandwidth235
ProcedureStepDescriptionFunctional_Dr.Bernhardt
ProtocolNamemprage-0.8iso
PulseSequenceDetails%SiemensSeq%_tfl
ReceiveCoilActiveElementsHC1-7
ReceiveCoilNameHeadNeck_64
ReconMatrixPE320
RefLinesPE32
RepetitionTime2.3
SAR0.0468511
ScanOptionsIR
ScanningSequenceGR_IR
SequenceName_tfl3d1_16ns
SequenceVariantSK_SP_MP
SeriesDescriptionmprage-0.8iso
SeriesNumber19
ShimSetting[323, -11647, -6442, 553, 61, -280, 151, -28]
SliceThickness0.8
SoftwareVersionssyngo_MR_E11
StationNameMRC35056
TxRefAmp216.773
md5sum219fd188e66e005410a6ed6e2cfb4df2
softwaremriqc
version0.15.2
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.