MRIQC: individual T1w report

Summary

  • BIDS filename: sub-HC39_ses-pre_run-1_T1w.
  • Date and time: 2020-07-25, 03:56.
  • MRIQC version: 0.15.2.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.7096359538705062
cnr1.7960408134633148
efc0.6634318408243692
fber38.71446228027344
fwhmavg3.243804118330219
fwhmx3.3306374503696343
fwhmy3.252212451538258
fwhmz3.1485624530827634
icvscsf0.20342863983405501
icvsgm0.41671620877746085
icvswm0.37985515138848414
inumed1.4499956369400024
inurange0.6229689717292786
qi10.0
qi20.004787117763739282
rpvecsf24.541347878610388
rpvegm12.365892145474335
rpvewm15.61597715629001
sizex224
sizey320
sizez320
snrcsf0.9367132741291311
snrgm7.559511261945293
snrtotal8.721547873080658
snrwm17.668419083167553
snrdcsf48.278381719328834
snrdgm81.44997368336482
snrdtotal77.75120757994146
snrdwm103.52526733713074
spacingx0.800000011920929
spacingy0.800000011920929
spacingz0.800000011920929
summarybgk26.04001534453198
summarybgmad6.328455535927407
summarybgmean126.07986450195312
summarybgmedian126.04776000976562
summarybgn7610725.0
summarybgp05115.57060241699219
summarybgp95137.31260375976564
summarybgstdv7.788851737976074
summarycsfk1.2146659441661027
summarycsfmad137.42837564955073
summarycsfmean684.6115112304688
summarycsfmedian466.35723876953125
summarycsfn135341.0
summarycsfp05315.3011779785156
summarycsfp951843.2584228515625
summarycsfstdv497.8636779785156
summarygmk0.028201973609996323
summarygmmad102.15612506685655
summarygmmean804.9048461914062
summarygmmedian786.78662109375
summarygmn111826.0
summarygmp05662.9062194824219
summarygmp95998.0193023681641
summarygmstdv104.07856750488281
summarywmk2.776136300272773
summarywmmad49.16798150143265
summarywmmean1004.5253295898438
summarywmmedian1000.0285034179688
summarywmn537392.0
summarywmp05921.5377258300782
summarywmp951102.3770507812499
summarywmstdv56.5997200012207
tpmoverlapcsf0.10545670241117477
tpmoverlapgm0.35451918840408325
tpmoverlapwm0.4759473502635956
wm2max0.3506571105528975
AcquisitionMatrixPE320
AcquisitionNumber1
AcquisitionTime14:06:46.982500
BaseResolution320
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20200427
DeviceSerialNumber167017
DwellTime6.6e-06
EchoTime0.00314
FlipAngle9
ImageOrientationPatientDICOM[-0.0275317, 0.996429, 0.0798144, 0.028144, 0.0805857, -0.99635]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM', 'FM', 'FIL']
ImagingFrequency123.25
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressUniversity_Street_3801_Montreal_District_CA_H3A_2B4
InstitutionNameMc_Connell_Brain_Imaging_Centre
InstitutionalDepartmentNameDepartment
InversionTime0.9
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
ParallelReductionFactorInPlane2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps319
PhaseResolution1
PixelBandwidth235
ProcedureStepDescriptionFunctional_Dr.Bernhardt
ProtocolNamemprage-0.8iso
PulseSequenceDetails%SiemensSeq%_tfl
ReceiveCoilActiveElementsHC1-7
ReceiveCoilNameHeadNeck_64
ReconMatrixPE320
RefLinesPE32
RepetitionTime2.3
SAR0.0592853
ScanOptionsIR
ScanningSequenceGR_IR
SequenceName_tfl3d1_16ns
SequenceVariantSK_SP_MP
SeriesDescriptionmprage-0.8iso
SeriesNumber20
ShimSetting[315, -11640, -6436, 260, -42, -484, 29, 4]
SliceThickness0.8
SoftwareVersionssyngo_MR_E11
StationNameMRC35056
TxRefAmp227.308
md5sumf97b91ae9de76c81c162c908040456bc
softwaremriqc
version0.15.2
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.