MRIQC: individual T1w report

Summary

  • BIDS filename: sub-HC39_ses-pre_run-2_T1w.
  • Date and time: 2020-07-25, 03:37.
  • MRIQC version: 0.15.2.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.4960124513251462
cnr2.3746437901808344
efc0.6586475618455033
fber41.18349838256836
fwhmavg3.3255416171122345
fwhmx3.4300124488888315
fwhmy3.352387450045534
fwhmz3.194224952402339
icvscsf0.20024534017249115
icvsgm0.40635296503747753
icvswm0.39340169479003134
inumed1.489598035812378
inurange0.5667351126670837
qi10.0
qi20.004949969700359944
rpvecsf26.17975285389439
rpvegm13.372922080990408
rpvewm16.163612508789942
sizex224
sizey320
sizez320
snrcsf1.0046999962622232
snrgm9.123767795017702
snrtotal9.542261554085735
snrwm18.498316870977284
snrdcsf48.1552163674908
snrdgm81.22035412380549
snrdtotal78.61283670987318
snrdwm106.46293963832325
spacingx0.800000011920929
spacingy0.800000011920929
spacingz0.800000011920929
summarybgk21.854930442702404
summarybgmad6.153864736651941
summarybgmean122.78304290771484
summarybgmedian122.72716522216797
summarybgn7813469.0
summarybgp05112.54300994873047
summarybgp95133.69871520996094
summarybgstdv7.4508562088012695
summarycsfk2.923418631898543
summarycsfmad116.66861905143848
summarycsfmean626.242919921875
summarycsfmedian452.3343505859375
summarycsfn116880.0
summarycsfp05314.73982391357424
summarycsfp951788.9279174804688
summarycsfstdv450.2164001464844
summarygmk1.4862701434790448
summarygmmad69.91120089523386
summarygmmean775.4834594726562
summarygmmedian762.9237060546875
summarygmn74120.0
summarygmp05662.5421813964845
summarygmp95936.6193420410157
summarygmstdv83.61880493164062
summarywmk1.9468335614653345
summarywmmad47.6983647210591
summarywmmean1003.6106567382812
summarywmmedian1000.0338134765625
summarywmn527893.0
summarywmp05922.1790161132812
summarywmp951096.85322265625
summarywmstdv54.06074905395508
tpmoverlapcsf0.11754857748746872
tpmoverlapgm0.38135185837745667
tpmoverlapwm0.48226791620254517
wm2max0.3599134954511117
AcquisitionMatrixPE320
AcquisitionNumber1
AcquisitionTime13:11:12.550000
BaseResolution320
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20200427
DeviceSerialNumber167017
DwellTime6.6e-06
EchoTime0.00314
FlipAngle9
ImageOrientationPatientDICOM[-0.0275317, 0.996429, 0.0798144, 0.028144, 0.0805857, -0.99635]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM', 'FM', 'FIL']
ImagingFrequency123.25
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressUniversity_Street_3801_Montreal_District_CA_H3A_2B4
InstitutionNameMc_Connell_Brain_Imaging_Centre
InstitutionalDepartmentNameDepartment
InversionTime0.9
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
ParallelReductionFactorInPlane2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps319
PhaseResolution1
PixelBandwidth235
ProcedureStepDescriptionFunctional_Dr.Bernhardt
ProtocolNamemprage-0.8iso
PulseSequenceDetails%SiemensSeq%_tfl
ReceiveCoilActiveElementsHC1-7
ReceiveCoilNameHeadNeck_64
ReconMatrixPE320
RefLinesPE32
RepetitionTime2.3
SAR0.0592853
ScanOptionsIR
ScanningSequenceGR_IR
SequenceName_tfl3d1_16ns
SequenceVariantSK_SP_MP
SeriesDescriptionmprage-0.8iso
SeriesNumber7
ShimSetting[315, -11640, -6436, 260, -42, -484, 29, 4]
SliceThickness0.8
SoftwareVersionssyngo_MR_E11
StationNameMRC35056
TxRefAmp227.308
md5sum6a9b50359375e3e7dc3a3547c9cfd6c5
softwaremriqc
version0.15.2
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.