MRIQC: individual T1w report

Summary

  • BIDS filename: sub-HC41_ses-pre_run-1_T1w.
  • Date and time: 2020-07-25, 06:44.
  • MRIQC version: 0.15.2.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.648895271334718
cnr1.8461224631387956
efc0.7074471978051687
fber33.786476135253906
fwhmavg3.3823041162664076
fwhmx3.351037450065651
fwhmy3.421824949010835
fwhmz3.374049949722738
icvscsf0.2187288434637879
icvsgm0.4418808594280261
icvswm0.33939029710818597
inumed1.4368422031402588
inurange0.717042702436447
qi10.0
qi20.005028590819139231
rpvecsf20.157199362815373
rpvegm10.345356936986969
rpvewm14.818784399366217
sizex224
sizey320
sizez320
snrcsf1.2569884783585772
snrgm8.187055253913508
snrtotal7.935813204916113
snrwm14.363395882476253
snrdcsf44.357267303431975
snrdgm74.65179835608376
snrdtotal71.68994873259221
snrdwm96.06078053826089
spacingx0.800000011920929
spacingy0.800000011920929
spacingz0.800000011920929
summarybgk6856.819711000231
summarybgmad6.8203185949293115
summarybgmean137.90863037109375
summarybgmedian137.38339233398438
summarybgn7485907.0
summarybgp05126.4285659790039
summarybgp95149.6558639526367
summarybgstdv26.77358055114746
summarycsfk9.572973579982687
summarycsfmad111.79378603672197
summarycsfmean561.2918701171875
summarycsfmedian461.78277587890625
summarycsfn186674.0
summarycsfp05320.7254333496094
summarycsfp951584.9628601074232
summarycsfstdv367.371337890625
summarygmk0.4656672828778108
summarygmmad86.37483613865754
summarygmmean793.13232421875
summarygmmedian777.1649780273438
summarygmn148782.0
summarygmp05663.4209289550781
summarygmp95974.6691436767577
summarygmstdv94.92575073242188
summarywmk3.880186980432593
summarywmmad58.25023220722138
summarywmmean1006.9367065429688
summarywmmedian1000.0438842773438
summarywmn503287.0
summarywmp05908.6373168945313
summarywmp951128.1982543945312
summarywmstdv69.62440490722656
tpmoverlapcsf0.0894608199596405
tpmoverlapgm0.352634459733963
tpmoverlapwm0.4548512101173401
wm2max0.3454501812446069
AcquisitionMatrixPE320
AcquisitionNumber1
AcquisitionTime17:14:46.665000
BaseResolution320
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20200427
DeviceSerialNumber167017
DwellTime6.6e-06
EchoTime0.00314
FlipAngle9
ImageOrientationPatientDICOM[-0.0196967, 0.989517, 0.143068, 0.0307062, 0.143627, -0.989155]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM', 'FM', 'FIL']
ImagingFrequency123.25
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressUniversity_Street_3801_Montreal_District_CA_H3A_2B4
InstitutionNameMc_Connell_Brain_Imaging_Centre
InstitutionalDepartmentNameDepartment
InversionTime0.9
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
ParallelReductionFactorInPlane2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps319
PhaseResolution1
PixelBandwidth235
ProcedureStepDescriptionFunctional_Dr.Bernhardt
ProtocolNamemprage-0.8iso
PulseSequenceDetails%SiemensSeq%_tfl
ReceiveCoilActiveElementsHC1-7
ReceiveCoilNameHeadNeck_64
ReconMatrixPE320
RefLinesPE32
RepetitionTime2.3
SAR0.0529591
ScanOptionsIR
ScanningSequenceGR_IR
SequenceName_tfl3d1_16ns
SequenceVariantSK_SP_MP
SeriesDescriptionmprage-0.8iso
SeriesNumber19
ShimSetting[325, -11602, -6416, 280, -21, -316, 28, 13]
SliceThickness0.8
SoftwareVersionssyngo_MR_E11
StationNameMRC35056
TxRefAmp242.589
md5sumf4b6940830d5d5bf6a7da0636cf1e19d
softwaremriqc
version0.15.2
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.