MRIQC: individual T1w report

Summary

  • BIDS filename: sub-HC41_ses-pre_run-2_T1w.
  • Date and time: 2020-07-25, 06:24.
  • MRIQC version: 0.15.2.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.6752272233416529
cnr1.7952608892594895
efc0.7036292935162382
fber34.10084533691406
fwhmavg3.3850916162248708
fwhmx3.35909994994551
fwhmy3.4245249489706016
fwhmz3.3716499497585004
icvscsf0.2101136546475378
icvsgm0.44486990772586016
icvswm0.34501643762660206
inumed1.4326634407043457
inurange0.7080550491809845
qi10.0
qi20.004945125302186839
rpvecsf21.130132657748575
rpvegm10.4923274340518
rpvewm14.867065888615246
sizex224
sizey320
sizez320
snrcsf1.2712085170460945
snrgm8.130130616571808
snrtotal7.972613765698061
snrwm14.516502163476282
snrdcsf44.19968716724565
snrdgm74.48226103552282
snrdtotal71.28188356061655
snrdwm95.16370247908114
spacingx0.800000011920929
spacingy0.800000011920929
spacingz0.800000011920929
summarybgk7829.951906300241
summarybgmad6.884589726868619
summarybgmean139.53097534179688
summarybgmedian139.15333557128906
summarybgn7688354.0
summarybgp05127.97391242980957
summarybgp95151.4004264831543
summarybgstdv25.324541091918945
summarycsfk9.495237516373702
summarycsfmad104.16597226986671
summarycsfmean563.2847900390625
summarycsfmedian464.4784240722656
summarycsfn168395.0
summarycsfp05328.18577270507814
summarycsfp951598.8010253906248
summarycsfstdv365.38226318359375
summarygmk0.3178358185622727
summarygmmad89.67598788622797
summarygmmean800.0730590820312
summarygmmedian782.7069702148438
summarygmn144970.0
summarygmp05669.4689544677734
summarygmp95982.0485046386718
summarygmstdv96.27204132080078
summarywmk4.640049620892668
summarywmmad57.07367007068513
summarywmmean1007.2616577148438
summarywmmedian1000.0407104492188
summarywmn505297.0
summarywmp05911.2968627929688
summarywmp951126.131591796875
summarywmstdv68.88985443115234
tpmoverlapcsf0.09261098504066467
tpmoverlapgm0.35522177815437317
tpmoverlapwm0.45479217171669006
wm2max0.3355829226466938
AcquisitionMatrixPE320
AcquisitionNumber1
AcquisitionTime16:25:1.517500
BaseResolution320
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20200427
DeviceSerialNumber167017
DwellTime6.6e-06
EchoTime0.00314
FlipAngle9
ImageOrientationPatientDICOM[-0.0196967, 0.989517, 0.143068, 0.0307062, 0.143627, -0.989155]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM', 'FM', 'FIL']
ImagingFrequency123.25
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressUniversity_Street_3801_Montreal_District_CA_H3A_2B4
InstitutionNameMc_Connell_Brain_Imaging_Centre
InstitutionalDepartmentNameDepartment
InversionTime0.9
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
ParallelReductionFactorInPlane2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps319
PhaseResolution1
PixelBandwidth235
ProcedureStepDescriptionFunctional_Dr.Bernhardt
ProtocolNamemprage-0.8iso
PulseSequenceDetails%SiemensSeq%_tfl
ReceiveCoilActiveElementsHC1-7
ReceiveCoilNameHeadNeck_64
ReconMatrixPE320
RefLinesPE32
RepetitionTime2.3
SAR0.0529591
ScanOptionsIR
ScanningSequenceGR_IR
SequenceName_tfl3d1_16ns
SequenceVariantSK_SP_MP
SeriesDescriptionmprage-0.8iso
SeriesNumber7
ShimSetting[325, -11602, -6416, 280, -21, -316, 28, 13]
SliceThickness0.8
SoftwareVersionssyngo_MR_E11
StationNameMRC35056
TxRefAmp242.589
md5sumbc0ecf75f0bc2aae53a2e890ade6d81a
softwaremriqc
version0.15.2
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.