MRIQC: individual T1w report

Summary

  • BIDS filename: sub-HC42_ses-pre_run-1_T1w.
  • Date and time: 2020-07-25, 08:04.
  • MRIQC version: 0.15.2.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.6552645664204585
cnr1.7834662550889782
efc0.675768192911723
fber31.184011459350586
fwhmavg3.4454374486589816
fwhmx3.4865999480456122
fwhmy3.439974948740379
fwhmz3.4097374491909527
icvscsf0.20866872148151017
icvsgm0.4322891284563377
icvswm0.3590421500621521
inumed1.4055495262145996
inurange0.6785324454307555
qi10.0
qi20.004428160999730941
rpvecsf23.07998180965567
rpvegm11.745830255544302
rpvewm15.890732642675772
sizex224
sizey320
sizez320
snrcsf1.1312033822760317
snrgm7.592160910550098
snrtotal8.90782708979732
snrwm18.00011697656583
snrdcsf46.47533905824392
snrdgm77.31405946585478
snrdtotal74.10596540194763
snrdwm98.52849768174417
spacingx0.800000011920929
spacingy0.800000011920929
spacingz0.800000011920929
summarybgk6837.657064875739
summarybgmad6.649347429976369
summarybgmean141.86419677734375
summarybgmedian141.51239013671875
summarybgn8311236.0
summarybgp05130.62881088256836
summarybgp95153.00657653808594
summarybgstdv28.399442672729492
summarycsfk4.366241218502761
summarycsfmad121.26308876516103
summarycsfmean615.7977905273438
summarycsfmedian471.704345703125
summarycsfn156100.0
summarycsfp05322.8908325195313
summarycsfp951741.3032348632812
summarycsfstdv416.9920654296875
summarygmk0.23510605424114717
summarygmmad92.96017259791155
summarygmmean805.041748046875
summarygmmedian784.703857421875
summarygmn138423.0
summarygmp05666.5268432617188
summarygmp951003.043829345703
summarygmstdv103.35674285888672
summarywmk3.5784063638746275
summarywmmad48.12959890515874
summarywmmean1002.4033813476562
summarywmmedian1000.0211181640625
summarywmn540778.0
summarywmp05918.2782043457031
summarywmp951092.6566223144532
summarywmstdv55.55631637573242
tpmoverlapcsf0.09252047538757324
tpmoverlapgm0.35474658012390137
tpmoverlapwm0.47703301906585693
wm2max0.32602255605937647
AcquisitionMatrixPE320
AcquisitionNumber1
AcquisitionTime15:17:32.095000
BaseResolution320
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20200427
DeviceSerialNumber167017
DwellTime6.6e-06
EchoTime0.00314
FlipAngle9
ImageOrientationPatientDICOM[0.048113, 0.989651, 0.135187, 0.0188859, 0.134418, -0.990745]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM', 'FM', 'FIL']
ImagingFrequency123.25
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressUniversity_Street_3801_Montreal_District_CA_H3A_2B4
InstitutionNameMc_Connell_Brain_Imaging_Centre
InstitutionalDepartmentNameDepartment
InversionTime0.9
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
ParallelReductionFactorInPlane2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps319
PhaseResolution1
PixelBandwidth235
ProcedureStepDescriptionFunctional_Dr.Bernhardt
ProtocolNamemprage-0.8iso
PulseSequenceDetails%SiemensSeq%_tfl
ReceiveCoilActiveElementsHC1-7
ReceiveCoilNameHeadNeck_64
ReconMatrixPE320
RefLinesPE32
RepetitionTime2.3
SAR0.0444932
ScanOptionsIR
ScanningSequenceGR_IR
SequenceName_tfl3d1_16ns
SequenceVariantSK_SP_MP
SeriesDescriptionmprage-0.8iso
SeriesNumber19
ShimSetting[314, -11625, -6465, 421, 6, -380, -32, 46]
SliceThickness0.8
SoftwareVersionssyngo_MR_E11
StationNameMRC35056
TxRefAmp220.38
md5sum8c927854fe07db001a8dac7f1b7c2481
softwaremriqc
version0.15.2
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.