MRIQC: individual T1w report

Summary

  • BIDS filename: sub-HC43_ses-pre_T1w.
  • Date and time: 2020-07-25, 09:05.
  • MRIQC version: 0.15.2.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.6046986614529508
cnr2.093526563633221
efc0.6704983444581573
fber24.94706153869629
fwhmavg3.422987448993512
fwhmx3.4720749482620517
fwhmy3.3938124494282538
fwhmz3.4030749492902315
icvscsf0.22338184304085187
icvsgm0.42522653814646205
icvswm0.35139161881268605
inumed1.4311258792877197
inurange0.5329916477203369
qi10.0
qi20.0029163489111839374
rpvecsf26.27882540403092
rpvegm14.100312625230549
rpvewm18.914312089284113
sizex224
sizey320
sizez320
snrcsf1.3280372880031779
snrgm9.430582811128225
snrtotal8.239482357618542
snrwm13.95982697372422
snrdcsf21.888671103737938
snrdgm39.67185954222951
snrdtotal37.67593597197322
snrdwm51.467277269952206
spacingx0.800000011920929
spacingy0.800000011920929
spacingz0.800000011920929
summarybgk88.8968435752986
summarybgmad12.729349003734315
summarybgmean156.489501953125
summarybgmedian156.1439208984375
summarybgn8725178.0
summarybgp05135.97692642211913
summarybgp95178.05409240722656
summarybgstdv13.117304801940918
summarycsfk8.418155720645087
summarycsfmad108.26109080608265
summarycsfmean518.171630859375
summarycsfmedian425.29852294921875
summarycsfn144531.0
summarycsfp05301.9794006347656
summarycsfp951459.0110473632812
summarycsfstdv320.24481201171875
summarygmk0.6392052489908226
summarygmmad75.02940907271105
summarygmmean776.7630615234375
summarygmmedian770.8272094726562
summarygmn67491.0
summarygmp05652.6846618652344
summarygmp95922.8456115722656
summarygmstdv81.73635864257812
summarywmk2.7075922237659773
summarywmmad63.558968886350385
summarywmmean1006.3148193359375
summarywmmedian1000.0130615234375
summarywmn399220.0
summarywmp05902.8715454101563
summarywmp951128.799609375
summarywmstdv71.63497161865234
tpmoverlapcsf0.10427793860435486
tpmoverlapgm0.37416139245033264
tpmoverlapwm0.4778863489627838
wm2max0.3172043542048961
AcquisitionMatrixPE320
AcquisitionNumber1
AcquisitionTime17:28:57.595000
BaseResolution320
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20200427
DeviceSerialNumber167017
DwellTime6.6e-06
EchoTime0.00314
FlipAngle9
ImageOrientationPatientDICOM[0.0613604, 0.995857, -0.067108, -0.0832078, -0.0618969, -0.994608]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM']
ImagingFrequency123.25
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressUniversity_Street_3801_Montreal_District_CA_H3A_2B4
InstitutionNameMc_Connell_Brain_Imaging_Centre
InstitutionalDepartmentNameDepartment
InversionTime0.9
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
ParallelReductionFactorInPlane2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps319
PhaseResolution1
PixelBandwidth235
ProcedureStepDescriptionFunctional_Dr.Bernhardt
ProtocolNamemprage-0.8iso
PulseSequenceDetails%SiemensSeq%_tfl
ReceiveCoilActiveElementsHC1-7
ReceiveCoilNameHeadNeck_64
ReconMatrixPE320
RefLinesPE32
RepetitionTime2.3
SAR0.0501355
ScanOptionsIR
ScanningSequenceGR_IR
SequenceName_tfl3d1_16ns
SequenceVariantSK_SP_MP
SeriesDescriptionmprage-0.8iso_ORIG
SeriesNumber18
ShimSetting[304, -11626, -6486, 248, 100, -571, 6, 108]
SliceThickness0.8
SoftwareVersionssyngo_MR_E11
StationNameMRC35056
TxRefAmp222.664
md5sumd1cc43c5bb795f8bb401849ec2c28c91
softwaremriqc
version0.15.2
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.