MRIQC: individual T1w report

Summary

  • BIDS filename: sub-HC45_ses-pre_run-2_T1w.
  • Date and time: 2020-07-25, 11:30.
  • MRIQC version: 0.15.2.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.6213937200372522
cnr2.0057107972792676
efc0.6687564541998584
fber30.055694580078125
fwhmavg3.4142666157901296
fwhmx3.3811749496165673
fwhmy3.4698249482955794
fwhmz3.391799949458242
icvscsf0.20963010285148034
icvsgm0.4128446882824229
icvswm0.3775252088660968
inumed1.558365821838379
inurange0.5668778419494629
qi10.0
qi20.0036675191435533447
rpvecsf26.891795397420942
rpvegm14.188481255706705
rpvewm17.81769866256584
sizex224
sizey320
sizez320
snrcsf1.393907541454068
snrgm10.06875636911849
snrtotal8.545169925358527
snrwm14.172845865503026
snrdcsf41.36088077787649
snrdgm71.00645444406445
snrdtotal67.49215690548851
snrdwm90.10913549452461
spacingx0.800000011920929
spacingy0.800000011920929
spacingz0.800000011920929
summarybgk18.45272358517924
summarybgmad7.270782086367354
summarybgmean146.75546264648438
summarybgmedian146.62252807617188
summarybgn9207225.0
summarybgp05134.7648162841797
summarybgp95159.53099060058594
summarybgstdv8.26453971862793
summarycsfk11.364289581283897
summarycsfmad106.19642876580076
summarycsfmean545.5003662109375
summarycsfmedian459.02801513671875
summarycsfn126460.0
summarycsfp05317.53105468750005
summarycsfp951374.4431030273433
summarycsfstdv329.3089294433594
summarygmk0.5588393284675526
summarygmmad75.17057481128946
summarygmmean793.3450317382812
summarygmmedian788.0381469726562
summarygmn86512.0
summarygmp05674.7379913330078
summarygmp95930.0285186767578
summarygmstdv78.2652359008789
summarywmk10.508211110321113
summarywmmad56.5672832289641
summarywmmean1008.0219116210938
summarywmmedian1000.0419921875
summarywmn476879.0
summarywmp05915.9474914550781
summarywmp951121.4716796875
summarywmstdv70.56034851074219
tpmoverlapcsf0.10963641107082367
tpmoverlapgm0.3887951672077179
tpmoverlapwm0.4785608947277069
wm2max0.296802420268048
AcquisitionMatrixPE320
AcquisitionNumber1
AcquisitionTime16:23:43.087500
BaseResolution320
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20200427
DeviceSerialNumber167017
DwellTime6.6e-06
EchoTime0.00314
FlipAngle9
ImageOrientationPatientDICOM[-0.0245159, 0.98333, -0.180171, -0.00318953, -0.180301, -0.983606]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM', 'FM', 'FIL']
ImagingFrequency123.25
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressUniversity_Street_3801_Montreal_District_CA_H3A_2B4
InstitutionNameMc_Connell_Brain_Imaging_Centre
InstitutionalDepartmentNameDepartment
InversionTime0.9
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
ParallelReductionFactorInPlane2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps319
PhaseResolution1
PixelBandwidth235
ProcedureStepDescriptionFunctional_Dr.Bernhardt
ProtocolNamemprage-0.8iso
PulseSequenceDetails%SiemensSeq%_tfl
ReceiveCoilActiveElementsHC1-7
ReceiveCoilNameHeadNeck_64
ReconMatrixPE320
RefLinesPE32
RepetitionTime2.3
SAR0.0494242
ScanOptionsIR
ScanningSequenceGR_IR
SequenceName_tfl3d1_16ns
SequenceVariantSK_SP_MP
SeriesDescriptionmprage-0.8iso
SeriesNumber7
ShimSetting[323, -11586, -6463, 334, 2, -405, 24, -22]
SliceThickness0.8
SoftwareVersionssyngo_MR_E11
StationNameMRC35056
TxRefAmp236.305
md5sumd4edbf5bf79dcf484c00b73ae4f90661
softwaremriqc
version0.15.2
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.