MRIQC: individual T1w report

Summary

  • BIDS filename: sub-HC48_ses-pre_run-1_T1w.
  • Date and time: 2020-07-25, 21:05.
  • MRIQC version: 0.15.2.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.8713597670974308
cnr1.4504093023115068
efc0.7356646553928506
fber21.776920318603516
fwhmavg3.356741616647319
fwhmx3.3343124503148727
fwhmy3.448437448614278
fwhmz3.2874749510128063
icvscsf0.21362399466384457
icvsgm0.4256366128059963
icvswm0.3607393925301591
inumed1.4724953174591064
inurange0.705592930316925
qi10.0
qi20.004517757799235974
rpvecsf20.324481689456615
rpvegm10.582615726797805
rpvewm14.134899365140713
sizex224
sizey320
sizez320
snrcsf1.5863427474886918
snrgm7.542790347234534
snrtotal7.339877982630166
snrwm12.890500853167273
snrdcsf34.70386089150441
snrdgm62.3089185327613
snrdtotal58.052872199550244
snrdwm77.14583717438501
spacingx0.800000011920929
spacingy0.800000011920929
spacingz0.800000011920929
summarybgk28.529088472646606
summarybgmad8.492544406506111
summarybgmean167.56893920898438
summarybgmedian167.548095703125
summarybgn7864824.0
summarybgp05153.3791046142578
summarybgp95182.4425941467285
summarybgstdv9.927363395690918
summarycsfk19.56565007145832
summarycsfmad104.12586219703026
summarycsfmean508.0413818359375
summarycsfmedian449.86676025390625
summarycsfn161404.0
summarycsfp05314.6537368774414
summarycsfp95840.5820892333986
summarycsfstdv283.58648681640625
summarygmk-0.24628550152065287
summarygmmad110.96599828987539
summarygmmean820.89208984375
summarygmmedian807.7116088867188
summarygmn108898.0
summarygmp05664.7837280273437
summarygmp951010.842938232422
summarygmstdv107.08343505859375
summarywmk15.299100043248131
summarywmmad56.62370427896644
summarywmmean1008.9854736328125
summarywmmedian1000.0428466796875
summarywmn547080.0
summarywmp05912.3139556884765
summarywmp951126.7030578613283
summarywmstdv77.57975769042969
tpmoverlapcsf0.10577932745218277
tpmoverlapgm0.3535125255584717
tpmoverlapwm0.4522942304611206
wm2max0.42398190632429317
AcquisitionMatrixPE320
AcquisitionNumber1
AcquisitionTime17:07:24.422500
BaseResolution320
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20200427
DeviceSerialNumber167017
DwellTime6.6e-06
EchoTime0.00314
FlipAngle9
ImageOrientationPatientDICOM[0.0158178, 0.990338, 0.137768, -0.0158431, 0.138016, -0.990303]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM', 'FM', 'FIL']
ImagingFrequency123.25
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressUniversity_Street_3801_Montreal_District_CA_H3A_2B4
InstitutionNameMc_Connell_Brain_Imaging_Centre
InstitutionalDepartmentNameDepartment
InversionTime0.9
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
ParallelReductionFactorInPlane2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps319
PhaseResolution1
PixelBandwidth235
ProcedureStepDescriptionFunctional_Dr.Bernhardt
ProtocolNamemprage-0.8iso
PulseSequenceDetails%SiemensSeq%_tfl
ReceiveCoilActiveElementsHC1-7
ReceiveCoilNameHeadNeck_64
ReconMatrixPE320
RefLinesPE32
RepetitionTime2.3
SAR0.038066
ScanOptionsIR
ScanningSequenceGR_IR
SequenceName_tfl3d1_16ns
SequenceVariantSK_SP_MP
SeriesDescriptionmprage-0.8iso
SeriesNumber19
ShimSetting[308, -11588, -6422, 349, 14, -137, -126, 16]
SliceThickness0.8
SoftwareVersionssyngo_MR_E11
StationNameMRC35056
TxRefAmp220.353
md5sum57274079b010efb41595521151f63f82
softwaremriqc
version0.15.2
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.