MRIQC: individual T1w report

Summary

  • BIDS filename: sub-HC50_ses-pre_run-1_T1w.
  • Date and time: 2020-07-25, 23:49.
  • MRIQC version: 0.15.2.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.46767523486716384
cnr2.609290711038536
efc0.6549615649827524
fber36.64704513549805
fwhmavg3.5747916133981206
fwhmx3.622699946017564
fwhmy3.615712446121686
fwhmz3.4859624480551115
icvscsf0.20879359567148553
icvsgm0.39281441042772924
icvswm0.3983919939007852
inumed1.4905985593795776
inurange0.6135893583297729
qi10.00017882671373694196
qi20.0037158269989013924
rpvecsf22.966256981887938
rpvegm12.532312728171595
rpvewm14.821984884643394
sizex224
sizey320
sizez320
snrcsf1.3796103239721822
snrgm9.932866238581129
snrtotal10.222151551295932
snrwm19.353978091334486
snrdcsf44.535265095021
snrdgm77.73562761044349
snrdtotal74.91180374137363
snrdwm102.4645185186564
spacingx0.800000011920929
spacingy0.800000011920929
spacingz0.800000011920929
summarybgk18.090845563375016
summarybgmad6.393976572843711
summarybgmean125.3156509399414
summarybgmedian125.1762924194336
summarybgn7475274.0
summarybgp05114.66443328857423
summarybgp95136.5578773498535
summarybgstdv7.187234401702881
summarycsfk11.232905482047077
summarycsfmad97.48132209388848
summarycsfmean513.6795043945312
summarycsfmedian434.6536865234375
summarycsfn141640.0
summarycsfp05302.7661499023437
summarycsfp951339.84835205078
summarycsfstdv315.0542907714844
summarygmk0.8305055415213127
summarygmmad70.59757405364238
summarygmmean763.037841796875
summarygmmedian758.681396484375
summarygmn70416.0
summarygmp05645.2472381591797
summarygmp95894.5406494140625
summarygmstdv76.38037109375
summarywmk5.806682333079184
summarywmmad42.274976124764166
summarywmmean1004.0592651367188
summarywmmedian1000.029541015625
summarywmn612324.0
summarywmp05930.5499359130858
summarywmp951088.5658813476562
summarywmstdv51.670448303222656
tpmoverlapcsf0.11979340761899948
tpmoverlapgm0.3756605088710785
tpmoverlapwm0.4765315055847168
wm2max0.34325733367338407
AcquisitionMatrixPE320
AcquisitionNumber1
AcquisitionTime10:54:15.647500
BaseResolution320
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20200427
DeviceSerialNumber167017
DwellTime6.6e-06
EchoTime0.00314
FlipAngle9
ImageOrientationPatientDICOM[0.0303098, 0.968202, 0.248328, -0.00649803, 0.248628, -0.968577]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM', 'FM', 'FIL']
ImagingFrequency123.25
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressUniversity_Street_3801_Montreal_District_CA_H3A_2B4
InstitutionNameMc_Connell_Brain_Imaging_Centre
InstitutionalDepartmentNameDepartment
InversionTime0.9
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
ParallelReductionFactorInPlane2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps319
PhaseResolution1
PixelBandwidth235
ProcedureStepDescriptionFunctional_Dr.Bernhardt
ProtocolNamemprage-0.8iso_2
PulseSequenceDetails%SiemensSeq%_tfl
ReceiveCoilActiveElementsHC1-7
ReceiveCoilNameHeadNeck_64
ReconMatrixPE320
RefLinesPE32
RepetitionTime2.3
SAR0.0502497
ScanOptionsIR
ScanningSequenceGR_IR
SequenceName_tfl3d1_16ns
SequenceVariantSK_SP_MP
SeriesDescriptionmprage-0.8iso_2
SeriesNumber19
ShimSetting[306, -11633, -6428, 415, 50, -414, 45, 62]
SliceThickness0.8
SoftwareVersionssyngo_MR_E11
StationNameMRC35056
TxRefAmp217.896
md5sumc834b09ec31ac20cd84c498b72cbc5b0
softwaremriqc
version0.15.2
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.