MRIQC: individual T1w report

Summary

  • BIDS filename: sub-HC51_ses-pre_run-2_T1w.
  • Date and time: 2020-07-26, 00:57.
  • MRIQC version: 0.15.2.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.43999170288136896
cnr2.605763918293741
efc0.6843648419387275
fber22.171064376831055
fwhmavg3.900779108540528
fwhmx3.954724941070006
fwhmy4.04207493976839
fwhmz3.7055374447831895
icvscsf0.1928294448817554
icvsgm0.42345207738528273
icvswm0.38371847773296186
inumed1.6028273105621338
inurange0.5947834312915801
qi10.00012693667337278949
qi20.0037209063286679452
rpvecsf36.923653038323856
rpvegm17.899487885523275
rpvewm22.56987191023235
sizex224
sizey320
sizez320
snrcsf3.396247659660797
snrgm10.683049407980894
snrtotal9.994548259501627
snrwm15.90434771086319
snrdcsf29.8006565099915
snrdgm62.08728037178967
snrdtotal58.13337126945397
snrdwm82.51217692658074
spacingx0.800000011920929
spacingy0.800000011920929
spacingz0.800000011920929
summarybgk10703.79135095746
summarybgmad7.939984604458392
summarybgmean158.47109985351562
summarybgmedian158.35617065429688
summarybgn8754822.0
summarybgp05144.8601852416992
summarybgp95172.4990379333496
summarybgstdv10.483716011047363
summarycsfk35.10804811819775
summarycsfmad87.58831854528354
summarycsfmean378.7610168457031
summarycsfmedian361.1717529296875
summarycsfn66525.0
summarycsfp05256.2948669433594
summarycsfp95546.061181640625
summarycsfstdv106.34355163574219
summarygmk1.897067375821491
summarygmmad61.829779079622874
summarygmmean759.0285034179688
summarygmmedian752.472412109375
summarygmn61199.0
summarygmp05657.8654174804688
summarygmp95884.4764648437499
summarygmstdv70.43553161621094
summarywmk24.021893509403373
summarywmmad47.08637504797845
summarywmmean1005.4154663085938
summarywmmedian1000.0137939453125
summarywmn385399.0
summarywmp05924.8856201171875
summarywmp951096.8571166992188
summarywmstdv62.87667465209961
tpmoverlapcsf0.13874463737010956
tpmoverlapgm0.4023191034793854
tpmoverlapwm0.45767390727996826
wm2max0.34113182605643216
AcquisitionMatrixPE320
AcquisitionNumber1
AcquisitionTime15:53:38.670000
BaseResolution320
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20200427
DeviceSerialNumber167017
DwellTime6.6e-06
EchoTime0.00314
FlipAngle9
ImageOrientationPatientDICOM[0.0246989, 0.999514, -0.0190222, 0.00850896, -0.0192375, -0.999779]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM', 'FM', 'FIL']
ImagingFrequency123.25
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressUniversity_Street_3801_Montreal_District_CA_H3A_2B4
InstitutionNameMc_Connell_Brain_Imaging_Centre
InstitutionalDepartmentNameDepartment
InversionTime0.9
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
ParallelReductionFactorInPlane2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps319
PhaseResolution1
PixelBandwidth235
ProcedureStepDescriptionFunctional_Dr.Bernhardt
ProtocolNamemprage-0.8iso
PulseSequenceDetails%SiemensSeq%_tfl
ReceiveCoilActiveElementsHC1-7
ReceiveCoilNameHeadNeck_64
ReconMatrixPE320
RefLinesPE32
RepetitionTime2.3
SAR0.0370309
ScanOptionsIR
ScanningSequenceGR_IR
SequenceName_tfl3d1_16ns
SequenceVariantSK_SP_MP
SeriesDescriptionmprage-0.8iso
SeriesNumber7
ShimSetting[323, -11573, -6487, 504, 55, -147, -7, -8]
SliceThickness0.8
SoftwareVersionssyngo_MR_E11
StationNameMRC35056
TxRefAmp212.548
md5sumcfd10a612937025d1f52f53a0df5f935
softwaremriqc
version0.15.2
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.