MRIQC: individual T1w report

Summary

  • BIDS filename: sub-HC52_ses-pre_run-2_T1w.
  • Date and time: 2020-07-26, 02:43.
  • MRIQC version: 0.15.2.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.6885754500332483
cnr1.698856136183844
efc0.6823705421764842
fber27.8764705657959
fwhmavg3.587937446535566
fwhmx3.5614874469297018
fwhmy3.7067999447643767
fwhmz3.495524947912619
icvscsf0.19645034467402245
icvsgm0.43524675769440646
icvswm0.3683028976315711
inumed1.5938736200332642
inurange0.6825168967247008
qi10.00014484715808974757
qi20.0038594351124570134
rpvecsf26.991466513823394
rpvegm13.13068627405486
rpvewm17.46836260399899
sizex224
sizey320
sizez320
snrcsf1.3279622302924419
snrgm7.880411832813086
snrtotal8.358255838512877
snrwm15.866393452433103
snrdcsf39.149679785105874
snrdgm72.7635524924801
snrdtotal67.73327509118464
snrdwm91.28659299596795
spacingx0.800000011920929
spacingy0.800000011920929
spacingz0.800000011920929
summarybgk43.09981353631653
summarybgmad7.177056180128512
summarybgmean149.84024047851562
summarybgmedian149.6657257080078
summarybgn8489344.0
summarybgp05138.06451416015625
summarybgp95162.29658279418945
summarybgstdv7.917859077453613
summarycsfk13.103526839987627
summarycsfmad87.6585394511405
summarycsfmean513.3582153320312
summarycsfmedian428.886962890625
summarycsfn106647.0
summarycsfp05315.79127807617186
summarycsfp951234.3337036132802
summarycsfstdv322.9647216796875
summarygmk0.2301609225453456
summarygmmad90.44479821633195
summarygmmean816.4824829101562
summarygmmedian797.1288452148438
summarygmn100827.0
summarygmp05678.9249877929688
summarygmp951010.3164184570311
summarygmstdv101.15269470214844
summarywmk14.398643022005977
summarywmmad49.28159277373086
summarywmmean1005.489990234375
summarywmmedian1000.0498046875
summarywmn457907.0
summarywmp05921.279443359375
summarywmp951102.1434570312495
summarywmstdv63.02936553955078
tpmoverlapcsf0.1120094358921051
tpmoverlapgm0.3883785903453827
tpmoverlapwm0.47297075390815735
wm2max0.33901956484103096
AcquisitionMatrixPE320
AcquisitionNumber1
AcquisitionTime15:32:0.112500
BaseResolution320
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20200427
DeviceSerialNumber167017
DwellTime6.6e-06
EchoTime0.00314
FlipAngle9
ImageOrientationPatientDICOM[0.0328198, 0.984326, 0.173279, -0.0425619, 0.174592, -0.983721]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM', 'FM', 'FIL']
ImagingFrequency123.25
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressUniversity_Street_3801_Montreal_District_CA_H3A_2B4
InstitutionNameMc_Connell_Brain_Imaging_Centre
InstitutionalDepartmentNameDepartment
InversionTime0.9
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
ParallelReductionFactorInPlane2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps319
PhaseResolution1
PixelBandwidth235
ProcedureStepDescriptionFunctional_Dr.Bernhardt
ProtocolNamemprage-0.8iso
PulseSequenceDetails%SiemensSeq%_tfl
ReceiveCoilActiveElementsHC1-7
ReceiveCoilNameHeadNeck_64
ReconMatrixPE320
RefLinesPE32
RepetitionTime2.3
SAR0.0538664
ScanOptionsIR
ScanningSequenceGR_IR
SequenceName_tfl3d1_16ns
SequenceVariantSK_SP_MP
SeriesDescriptionmprage-0.8iso
SeriesNumber7
ShimSetting[322, -11646, -6471, 432, 75, -399, 33, 30]
SliceThickness0.8
SoftwareVersionssyngo_MR_E11
StationNameMRC35056
TxRefAmp223.083
md5sum465a21dd5addafb7cf252c2229925ccf
softwaremriqc
version0.15.2
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.