MRIQC: individual T1w report

Summary

  • BIDS filename: sub-HC54_ses-pre_run-2_T1w.
  • Date and time: 2020-07-27, 15:11.
  • MRIQC version: 0.15.2.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.5578569314083064
cnr2.2159929409204646
efc0.655039333096837
fber34.43650817871094
fwhmavg3.249858284906671
fwhmx3.3315624503558507
fwhmy3.23756245175656
fwhmz3.180449952607603
icvscsf0.2239059186179025
icvsgm0.41947180655242167
icvswm0.35662227482967584
inumed1.3846380710601807
inurange0.44802212715148926
qi11.655686387318208e-05
qi20.004182623969519635
rpvecsf24.75229128713774
rpvegm13.593789034517762
rpvewm18.075959246641894
sizex224
sizey320
sizez320
snrcsf1.5436656708040768
snrgm9.632377401036292
snrtotal9.248578967844052
snrwm16.569693831691783
snrdcsf43.361794275582774
snrdgm78.7578367878288
snrdtotal74.65997181127813
snrdwm101.86028437042282
spacingx0.800000011920929
spacingy0.800000011920929
spacingz0.800000011920929
summarybgk9693.064270809304
summarybgmad6.431863963978999
summarybgmean129.55648803710938
summarybgmedian129.33689880371094
summarybgn8477399.0
summarybgp05118.6349479675293
summarybgp95140.84866485595703
summarybgstdv19.745468139648438
summarycsfk16.380531826412103
summarycsfmad85.790219950141
summarycsfmean488.7059631347656
summarycsfmedian425.70855712890625
summarycsfn143726.0
summarycsfp05301.8294982910156
summarycsfp95987.1548461914062
summarycsfstdv275.7767333984375
summarygmk0.6797357844428196
summarygmmad72.63140133403927
summarygmmean781.5436401367188
summarygmmedian773.2125854492188
summarygmn78447.0
summarygmp05664.5540649414063
summarygmp95930.9192382812499
summarygmstdv80.27173614501953
summarywmk1.3741606781179128
summarywmmad53.896400307803084
summarywmmean1004.92724609375
summarywmmedian1000.0230712890625
summarywmn448518.0
summarywmp05915.1928924560547
summarywmp951110.9301635742186
summarywmstdv60.35247039794922
tpmoverlapcsf0.11534766852855682
tpmoverlapgm0.36062949895858765
tpmoverlapwm0.4420846700668335
wm2max0.36026416715957754
AcquisitionMatrixPE320
AcquisitionNumber1
AcquisitionTime15:53:31.527500
BaseResolution320
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20200427
DeviceSerialNumber167017
DwellTime6.6e-06
EchoTime0.00314
FlipAngle9
ImageOrientationPatientDICOM[0.0095353, 0.985748, 0.167959, -0.0114212, 0.168063, -0.98571]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM', 'FM', 'FIL']
ImagingFrequency123.25
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressUniversity_Street_3801_Montreal_District_CA_H3A_2B4
InstitutionNameMc_Connell_Brain_Imaging_Centre
InstitutionalDepartmentNameDepartment
InversionTime0.9
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
ParallelReductionFactorInPlane2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps319
PhaseResolution1
PixelBandwidth235
ProcedureStepDescriptionFunctional_Dr.Bernhardt
ProtocolNamemprage-0.8iso
PulseSequenceDetails%SiemensSeq%_tfl
ReceiveCoilActiveElementsHC1-7
ReceiveCoilNameHeadNeck_64
ReconMatrixPE320
RefLinesPE32
RepetitionTime2.3
SAR0.0545511
ScanOptionsIR
ScanningSequenceGR_IR
SequenceName_tfl3d1_16ns
SequenceVariantSK_SP_MP
SeriesDescriptionmprage-0.8iso
SeriesNumber7
ShimSetting[320, -11625, -6426, 304, 55, -339, -41, 10]
SliceThickness0.8
SoftwareVersionssyngo_MR_E11
StationNameMRC35056
TxRefAmp229.359
md5sum26e5559872092db324292792823fe337
softwaremriqc
version0.15.2
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.