MRIQC: individual T1w report

Summary

  • BIDS filename: sub-HC56_ses-pre_run-1_T1w.
  • Date and time: 2020-07-27, 19:46.
  • MRIQC version: 0.15.2.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.5946802697644841
cnr1.9563524155291074
efc0.6638875253987927
fber35.957305908203125
fwhmavg3.535841613978521
fwhmx3.4928249479528524
fwhmy3.5830874466078364
fwhmz3.5316124473748736
icvscsf0.21849829412492627
icvsgm0.41752877921214177
icvswm0.36397292666293196
inumed1.4686859846115112
inurange0.5785970389842985
qi10.0
qi20.0033014998259821462
rpvecsf22.145126229493847
rpvegm12.114252217766566
rpvewm16.065288195710803
sizex224
sizey320
sizez320
snrcsf1.4462312878625028
snrgm8.556850477113763
snrtotal8.013027151002904
snrwm14.03599968803245
snrdcsf45.03385832859801
snrdgm78.70508395291763
snrdtotal75.13023749844076
snrdwm101.65177021380664
spacingx0.800000011920929
spacingy0.800000011920929
spacingz0.800000011920929
summarybgk8.864709811384598
summarybgmad6.445069973577581
summarybgmean130.23236083984375
summarybgmedian130.1031036376953
summarybgn8334620.0
summarybgp05119.53376007080078
summarybgp95141.56189041137696
summarybgstdv7.140463829040527
summarycsfk11.31279637604603
summarycsfmad110.96857727933018
summarycsfmean519.1817626953125
summarycsfmedian443.031982421875
summarycsfn133439.0
summarycsfp05303.32786560058594
summarycsfp951287.695349121093
summarycsfstdv306.3343505859375
summarygmk0.9424138979651211
summarygmmad81.62053694688107
summarygmmean785.9463500976562
summarygmmedian774.2811889648438
summarygmn95410.0
summarygmp05657.6456512451173
summarygmp95953.5430389404297
summarygmstdv90.4862289428711
summarywmk16.259161130510808
summarywmmad52.62486801572963
summarywmmean1008.71826171875
summarywmmedian1000.0250244140625
summarywmn524363.0
summarywmp05920.0849731445312
summarywmp951116.5408935546875
summarywmstdv71.24708557128906
tpmoverlapcsf0.10446464270353317
tpmoverlapgm0.3635387122631073
tpmoverlapwm0.46294429898262024
wm2max0.3245712859460213
AcquisitionMatrixPE320
AcquisitionNumber1
AcquisitionTime17:00:36.105000
BaseResolution320
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20200427
DeviceSerialNumber167017
DwellTime6.6e-06
EchoTime0.00314
FlipAngle9
ImageOrientationPatientDICOM[0.0583402, 0.9962, -0.0646668, -0.0387733, -0.0624671, -0.997294]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM', 'FM', 'FIL']
ImagingFrequency123.25
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressUniversity_Street_3801_Montreal_District_CA_H3A_2B4
InstitutionNameMc_Connell_Brain_Imaging_Centre
InstitutionalDepartmentNameDepartment
InversionTime0.9
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
ParallelReductionFactorInPlane2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps319
PhaseResolution1
PixelBandwidth235
ProcedureStepDescriptionFunctional_Dr.Bernhardt
ProtocolNamemprage-0.8iso
PulseSequenceDetails%SiemensSeq%_tfl
ReceiveCoilActiveElementsHC1-7
ReceiveCoilNameHeadNeck_64
ReconMatrixPE320
RefLinesPE32
RepetitionTime2.3
SAR0.0494146
ScanOptionsIR
ScanningSequenceGR_IR
SequenceName_tfl3d1_16ns
SequenceVariantSK_SP_MP
SeriesDescriptionmprage-0.8iso
SeriesNumber32
ShimSetting[320, -11605, -6491, 484, 31, -418, -49, 20]
SliceThickness0.8
SoftwareVersionssyngo_MR_E11
StationNameMRC35056
TxRefAmp217.883
md5sum678afedf7932677ccd34df3d1cc77b45
softwaremriqc
version0.15.2
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.