MRIQC: individual T1w report

Summary

  • BIDS filename: sub-HC56_ses-pre_run-2_T1w.
  • Date and time: 2020-07-27, 19:22.
  • MRIQC version: 0.15.2.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.5348114022668913
cnr2.170438165020622
efc0.6540992340197052
fber37.03166198730469
fwhmavg3.5588666136354217
fwhmx3.4995749478522695
fwhmy3.6321874458761894
fwhmz3.5448374471778057
icvscsf0.21115747761459022
icvsgm0.4228318758679334
icvswm0.3660106465174764
inumed1.4682810306549072
inurange0.5757584512233733
qi10.0
qi20.0032411386555282243
rpvecsf23.27682694253494
rpvegm12.349778419107551
rpvewm16.49715057520794
sizex224
sizey320
sizez320
snrcsf1.3672034038838237
snrgm9.071588647334266
snrtotal8.51002601130298
snrwm15.09128598269085
snrdcsf47.11209218760773
snrdgm80.87870478457594
snrdtotal77.83715954874678
snrdwm105.52068167405668
spacingx0.800000011920929
spacingy0.800000011920929
spacingz0.800000011920929
summarybgk10.72967027050433
summarybgmad6.208690885280913
summarybgmean127.00946044921875
summarybgmedian126.9181137084961
summarybgn8595723.0
summarybgp05116.70700073242188
summarybgp95137.85836639404295
summarybgstdv6.856925010681152
summarycsfk9.85001160201013
summarycsfmad112.61066963517197
summarycsfmean532.2860717773438
summarycsfmedian446.4786682128906
summarycsfn123520.0
summarycsfp05304.12449645996094
summarycsfp951426.4307739257806
summarycsfstdv326.5621337890625
summarygmk1.2903587877508107
summarygmmad75.27644911522327
summarygmmean776.7716674804688
summarygmmedian766.4829711914062
summarygmn107528.0
summarygmp05658.7148681640625
summarygmp95932.394918823242
summarygmstdv84.49230194091797
summarywmk16.996371434408626
summarywmmad49.61839974744166
summarywmmean1006.4223022460938
summarywmmedian1000.0136108398438
summarywmn524662.0
summarywmp05921.1223388671874
summarywmp951104.666467285156
summarywmstdv66.26424407958984
tpmoverlapcsf0.107769675552845
tpmoverlapgm0.3717258870601654
tpmoverlapwm0.4681464433670044
wm2max0.31858109331435586
AcquisitionMatrixPE320
AcquisitionNumber1
AcquisitionTime15:15:1.205000
BaseResolution320
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20200427
DeviceSerialNumber167017
DwellTime6.6e-06
EchoTime0.00314
FlipAngle9
ImageOrientationPatientDICOM[0.0583402, 0.9962, -0.0646668, -0.0387733, -0.0624671, -0.997294]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM', 'FM', 'FIL']
ImagingFrequency123.25
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressUniversity_Street_3801_Montreal_District_CA_H3A_2B4
InstitutionNameMc_Connell_Brain_Imaging_Centre
InstitutionalDepartmentNameDepartment
InversionTime0.9
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
ParallelReductionFactorInPlane2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps319
PhaseResolution1
PixelBandwidth235
ProcedureStepDescriptionFunctional_Dr.Bernhardt
ProtocolNamemprage-0.8iso
PulseSequenceDetails%SiemensSeq%_tfl
ReceiveCoilActiveElementsHC1-7
ReceiveCoilNameHeadNeck_64
ReconMatrixPE320
RefLinesPE32
RepetitionTime2.3
SAR0.0494146
ScanOptionsIR
ScanningSequenceGR_IR
SequenceName_tfl3d1_16ns
SequenceVariantSK_SP_MP
SeriesDescriptionmprage-0.8iso
SeriesNumber7
ShimSetting[320, -11605, -6491, 484, 31, -418, -49, 20]
SliceThickness0.8
SoftwareVersionssyngo_MR_E11
StationNameMRC35056
TxRefAmp217.883
md5sum2f81fe495873c047df921752d28e28fe
softwaremriqc
version0.15.2
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.