MRIQC: individual T1w report

Summary

  • BIDS filename: sub-HC58_ses-pre_run-1_T1w.
  • Date and time: 2020-07-27, 21:38.
  • MRIQC version: 0.15.2.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.6578112416277636
cnr1.881813900101083
efc0.6813920884044726
fber37.01273727416992
fwhmavg3.32454578379374
fwhmx3.313762450621091
fwhmy3.397662449370884
fwhmz3.2622124513892468
icvscsf0.2134819663815481
icvsgm0.4108842985636059
icvswm0.375633735054846
inumed1.4856451749801636
inurange0.6785075187683103
qi10.00015725727302377213
qi20.003379240593803201
rpvecsf20.527416631280772
rpvegm10.860777792311717
rpvewm13.756006881767247
sizex224
sizey320
sizez320
snrcsf1.1194345287626881
snrgm7.741143848437418
snrtotal8.57333144522269
snrwm16.859415958467963
snrdcsf47.165290158134226
snrdgm80.56669829486162
snrdtotal77.03102420491047
snrdwm103.36108416173553
spacingx0.800000011920929
spacingy0.800000011920929
spacingz0.800000011920929
summarybgk16260.4354784599
summarybgmad6.338567889315957
summarybgmean127.9344482421875
summarybgmedian127.77368927001953
summarybgn7602308.0
summarybgp05117.45614891052246
summarybgp95138.97633361816406
summarybgstdv8.767457962036133
summarycsfk4.618976915710815
summarycsfmad113.93108961331401
summarycsfmean588.389404296875
summarycsfmedian456.33306884765625
summarycsfn171642.0
summarycsfp05307.765641784668
summarycsfp951683.1830505371083
summarycsfstdv407.6448669433594
summarygmk0.03937255068371526
summarygmmad96.49393109613312
summarygmmean797.2447509765625
summarygmmedian779.4979858398438
summarygmn111091.0
summarygmp05659.2902221679688
summarygmp95985.3077087402344
summarygmstdv100.69499969482422
summarywmk5.7455383779049445
summarywmmad48.57974567859356
summarywmmean1005.5869140625
summarywmmedian1000.0379638671875
summarywmn604228.0
summarywmp05922.5956787109376
summarywmp951102.644354248047
summarywmstdv59.31623840332031
tpmoverlapcsf0.10322548449039459
tpmoverlapgm0.3441023528575897
tpmoverlapwm0.4665473997592926
wm2max0.34729918362683077
AcquisitionMatrixPE320
AcquisitionNumber1
AcquisitionTime17:03:51.895000
BaseResolution320
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20200427
DeviceSerialNumber167017
DwellTime6.6e-06
EchoTime0.00314
FlipAngle9
ImageOrientationPatientDICOM[-0.00285257, 0.988358, 0.152116, 0.00923408, 0.152137, -0.988316]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM', 'FM', 'FIL']
ImagingFrequency123.25
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressUniversity_Street_3801_Montreal_District_CA_H3A_2B4
InstitutionNameMc_Connell_Brain_Imaging_Centre
InstitutionalDepartmentNameDepartment
InversionTime0.9
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
ParallelReductionFactorInPlane2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps319
PhaseResolution1
PixelBandwidth235
ProcedureStepDescriptionFunctional_Dr.Bernhardt
ProtocolNamemprage-0.8iso_2
PulseSequenceDetails%SiemensSeq%_tfl
ReceiveCoilActiveElementsHC1-7
ReceiveCoilNameHeadNeck_64
ReconMatrixPE320
RefLinesPE32
RepetitionTime2.3
SAR0.0502641
ScanOptionsIR
ScanningSequenceGR_IR
SequenceName_tfl3d1_16ns
SequenceVariantSK_SP_MP
SeriesDescriptionmprage-0.8iso_2
SeriesNumber19
ShimSetting[329, -11616, -6410, 385, 81, -250, 87, 4]
SliceThickness0.8
SoftwareVersionssyngo_MR_E11
StationNameMRC35056
TxRefAmp231.279
md5sum5d58dc55dbfc7f17e6c6c4652445e220
softwaremriqc
version0.15.2
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.