MRIQC: individual T1w report

Summary

  • BIDS filename: sub-HC59_ses-pre_run-1_T1w.
  • Date and time: 2020-07-27, 23:24.
  • MRIQC version: 0.15.2.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.54772907270557
cnr2.129387087427419
efc0.6627052190703066
fber28.219226837158203
fwhmavg3.460337448436954
fwhmx3.5017624478196736
fwhmy3.4515624485677114
fwhmz3.4276874489234768
icvscsf0.19556094211382952
icvsgm0.41644008630824436
icvswm0.38799897157792607
inumed1.5800684690475464
inurange0.6118535399436951
qi10.00011452259612963624
qi20.0030959391473801764
rpvecsf27.688174275622323
rpvegm13.824307522234573
rpvewm17.10323555766353
sizex224
sizey320
sizez320
snrcsf1.8060420057451834
snrgm9.229927918657985
snrtotal8.69829690799007
snrwm15.058920799567042
snrdcsf40.19294798860163
snrdgm70.70559383427324
snrdtotal67.5055903674034
snrdwm91.61822927933531
spacingx0.800000011920929
spacingy0.800000011920929
spacingz0.800000011920929
summarybgk12693.403008546928
summarybgmad7.150972190291828
summarybgmean143.42129516601562
summarybgmedian143.33184814453125
summarybgn8013453.0
summarybgp05131.48532104492188
summarybgp95156.04549865722655
summarybgstdv9.481362342834473
summarycsfk18.92435938006184
summarycsfmad83.05198920786651
summarycsfmean491.5169677734375
summarycsfmedian438.71575927734375
summarycsfn115190.0
summarycsfp05308.6134597778321
summarycsfp95814.8145507812499
summarycsfstdv242.91453552246094
summarygmk0.9808564924758048
summarygmmad74.62568410946258
summarygmmean781.5748291015625
summarygmmedian771.7686767578125
summarygmn75594.0
summarygmp05661.5293792724609
summarygmp95935.6208831787108
summarygmstdv83.61534118652344
summarywmk11.10019268057775
summarywmmad50.4025030325583
summarywmmean1009.4163818359375
summarywmmedian1000.03515625
summarywmn495899.0
summarywmp05925.5704345703125
summarywmp951121.2509033203125
summarywmstdv66.40808868408203
tpmoverlapcsf0.11432622373104095
tpmoverlapgm0.3908384442329407
tpmoverlapwm0.47392377257347107
wm2max0.30627604700147565
AcquisitionMatrixPE320
AcquisitionNumber1
AcquisitionTime13:11:20.237500
BaseResolution320
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20200427
DeviceSerialNumber167017
DwellTime6.6e-06
EchoTime0.00314
FlipAngle9
ImageOrientationPatientDICOM[0.0357996, 0.988625, 0.14608, -0.00164642, 0.146231, -0.989249]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM', 'FM', 'FIL']
ImagingFrequency123.25
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressUniversity_Street_3801_Montreal_District_CA_H3A_2B4
InstitutionNameMc_Connell_Brain_Imaging_Centre
InstitutionalDepartmentNameDepartment
InversionTime0.9
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
ParallelReductionFactorInPlane2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps319
PhaseResolution1
PixelBandwidth235
ProcedureStepDescriptionFunctional_Dr.Bernhardt
ProtocolNamemprage-0.8iso_2
PulseSequenceDetails%SiemensSeq%_tfl
ReceiveCoilActiveElementsHC1-7
ReceiveCoilNameHeadNeck_64
ReconMatrixPE320
RefLinesPE32
RepetitionTime2.3
SAR0.0527703
ScanOptionsIR
ScanningSequenceGR_IR
SequenceName_tfl3d1_16ns
SequenceVariantSK_SP_MP
SeriesDescriptionmprage-0.8iso_2
SeriesNumber19
ShimSetting[311, -11618, -6466, 326, 60, -364, -130, 14]
SliceThickness0.8
SoftwareVersionssyngo_MR_E11
StationNameMRC35056
TxRefAmp212.407
md5sumc69abeeb385ad8d37c575a83b94ee2d9
softwaremriqc
version0.15.2
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.