MRIQC: individual T1w report

Summary

  • BIDS filename: sub-HC60_ses-pre_run-1_T1w.
  • Date and time: 2020-07-28, 01:10.
  • MRIQC version: 0.15.2.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.6035982788497215
cnr2.0046837617224567
efc0.6576326302080981
fber33.319705963134766
fwhmavg3.3813999496132143
fwhmx3.3854499495528643
fwhmy3.548612447121554
fwhmz3.2101374521652244
icvscsf0.22141536652978253
icvsgm0.41301363910533523
icvswm0.3655709943648823
inumed1.4882392883300781
inurange0.5858412384986877
qi10.0
qi20.003145303274886369
rpvecsf22.5783266035114
rpvegm12.28472484861131
rpvewm15.763908987942877
sizex224
sizey320
sizez320
snrcsf1.5713389894770298
snrgm9.02413740537099
snrtotal7.992824171309455
snrwm13.382996119080346
snrdcsf40.46753742503501
snrdgm76.06445999441414
snrdtotal71.69690359654714
snrdwm98.55871337019228
spacingx0.800000011920929
spacingy0.800000011920929
spacingz0.800000011920929
summarybgk187.6813850875123
summarybgmad6.6473226970272075
summarybgmean129.61468505859375
summarybgmedian129.49264526367188
summarybgn7906119.0
summarybgp05118.4993667602539
summarybgp95141.56460723876953
summarybgstdv8.02081298828125
summarycsfk16.167269658033003
summarycsfmad87.50307615698812
summarycsfmean468.56396484375
summarycsfmedian410.60272216796875
summarycsfn140859.0
summarycsfp05292.15471801757815
summarycsfp95792.7454589843752
summarycsfstdv261.3066101074219
summarygmk0.05735162451165188
summarygmmad84.52434333669648
summarygmmean779.3644409179688
summarygmmedian771.785888671875
summarygmn84282.0
summarygmp05651.4887634277344
summarygmp95931.5723419189453
summarygmstdv85.52410888671875
summarywmk11.040482365635533
summarywmmad53.23930094197799
summarywmmean1011.3132934570312
summarywmmedian1000.023193359375
summarywmn459786.0
summarywmp05922.1551666259766
summarywmp951130.6487121582031
summarywmstdv74.72333526611328
tpmoverlapcsf0.1141960397362709
tpmoverlapgm0.32890400290489197
tpmoverlapwm0.4267283082008362
wm2max0.3107781309891049
AcquisitionMatrixPE320
AcquisitionNumber1
AcquisitionTime11:03:20.380000
BaseResolution320
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20200427
DeviceSerialNumber167017
DwellTime6.6e-06
EchoTime0.00314
FlipAngle9
ImageOrientationPatientDICOM[-0.0132947, 0.956698, 0.29078, 0.0218405, 0.291014, -0.956469]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM', 'FM', 'FIL']
ImagingFrequency123.25
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressUniversity_Street_3801_Montreal_District_CA_H3A_2B4
InstitutionNameMc_Connell_Brain_Imaging_Centre
InstitutionalDepartmentNameDepartment
InversionTime0.9
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
ParallelReductionFactorInPlane2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps319
PhaseResolution1
PixelBandwidth235
ProcedureStepDescriptionFunctional_Dr.Bernhardt
ProtocolNamemprage-0.8iso_2
PulseSequenceDetails%SiemensSeq%_tfl
ReceiveCoilActiveElementsHC1-7
ReceiveCoilNameHeadNeck_64
ReconMatrixPE320
RefLinesPE32
RepetitionTime2.3
SAR0.0443106
ScanOptionsIR
ScanningSequenceGR_IR
SequenceName_tfl3d1_16ns
SequenceVariantSK_SP_MP
SeriesDescriptionmprage-0.8iso_2
SeriesNumber19
ShimSetting[323, -11630, -6434, 468, -24, -320, -39, 32]
SliceThickness0.8
SoftwareVersionssyngo_MR_E11
StationNameMRC35056
TxRefAmp214.677
md5sum56784fa779d9e219ca95c8cffc8fec83
softwaremriqc
version0.15.2
Rate Image
Download

For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.