MRIQC: individual T1w report

Summary

  • BIDS filename: sub-HC61_ses-pre_run-1_T1w.
  • Date and time: 2020-07-28, 14:52.
  • MRIQC version: 0.15.2.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.5647092111150374
cnr1.942621070087252
efc0.6830622260278083
fber21.6270751953125
fwhmavg3.719254111245462
fwhmx3.6975499449022124
fwhmy3.826862442975306
fwhmz3.633349945858867
icvscsf0.2375758356424995
icvsgm0.4083360429018828
icvswm0.3540881214556177
inumed1.5329186916351318
inurange0.6319724917411804
qi10.0
qi20.0036178868030671534
rpvecsf21.960439988469055
rpvegm12.97385387415109
rpvewm17.240006690335115
sizex224
sizey320
sizez320
snrcsf1.8683485179188752
snrgm8.663001633689916
snrtotal7.701925353311435
snrwm12.574425908325516
snrdcsf32.592324747678745
snrdgm62.46061784093065
snrdtotal58.79377917545719
snrdwm81.32839493776218
spacingx0.800000011920929
spacingy0.800000011920929
spacingz0.800000011920929
summarybgk5.950436623994397
summarybgmad8.055541430204952
summarybgmean161.16366577148438
summarybgmedian161.08023071289062
summarybgn8492943.0
summarybgp05147.54391479492188
summarybgp95175.20901489257812
summarybgstdv8.844285011291504
summarycsfk19.61814000513539
summarycsfmad92.68621152512556
summarycsfmean444.248779296875
summarycsfmedian400.75445556640625
summarycsfn163603.0
summarycsfp05278.95594177246096
summarycsfp95709.8352355957029
summarycsfstdv214.4959716796875
summarygmk0.3843374149633054
summarygmmad81.76061679516273
summarygmmean774.78955078125
summarygmmedian768.0142822265625
summarygmn87096.0
summarygmp05637.1916198730469
summarygmp95933.273681640625
summarygmstdv88.65401458740234
summarywmk21.76096147110869
summarywmmad49.25064490027328
summarywmmean1010.0579833984375
summarywmmedian1000.0120239257812
summarywmn478727.0
summarywmp05920.4293151855468
summarywmp951120.423046875
summarywmstdv79.5273666381836
tpmoverlapcsf0.10440726578235626
tpmoverlapgm0.3536339998245239
tpmoverlapwm0.4656629264354706
wm2max0.29136970545487134
AcquisitionMatrixPE320
AcquisitionNumber1
AcquisitionTime12:38:57.900000
BaseResolution320
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20200427
DeviceSerialNumber167017
DwellTime6.6e-06
EchoTime0.00314
FlipAngle9
ImageOrientationPatientDICOM[0.0133313, 0.989662, 0.142801, 0.00383208, 0.142762, -0.98975]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM', 'FM', 'FIL']
ImagingFrequency123.25
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressUniversity_Street_3801_Montreal_District_CA_H3A_2B4
InstitutionNameMc_Connell_Brain_Imaging_Centre
InstitutionalDepartmentNameDepartment
InversionTime0.9
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
ParallelReductionFactorInPlane2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps319
PhaseResolution1
PixelBandwidth235
ProcedureStepDescriptionFunctional_Dr.Bernhardt
ProtocolNamemprage-0.8iso_2
PulseSequenceDetails%SiemensSeq%_tfl
ReceiveCoilActiveElementsHC1-7
ReceiveCoilNameHeadNeck_64
ReconMatrixPE320
RefLinesPE32
RepetitionTime2.3
SAR0.0400934
ScanOptionsIR
ScanningSequenceGR_IR
SequenceName_tfl3d1_16ns
SequenceVariantSK_SP_MP
SeriesDescriptionmprage-0.8iso_2
SeriesNumber19
ShimSetting[317, -11621, -6473, 500, 69, -237, 0, -1]
SliceThickness0.8
SoftwareVersionssyngo_MR_E11
StationNameMRC35056
TxRefAmp212.889
md5sum64bb246774a3cee76d2903623e8c6d53
softwaremriqc
version0.15.2
Rate Image
Download

For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.