MRIQC: individual T1w report

Summary

  • BIDS filename: sub-HC61_ses-pre_run-2_T1w.
  • Date and time: 2020-07-28, 14:29.
  • MRIQC version: 0.15.2.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.5155470571857169
cnr2.126598138683995
efc0.6771362091116527
fber23.120105743408203
fwhmavg3.5309457807181412
fwhmx3.538149947277457
fwhmy3.6254749459762134
fwhmz3.4292124489007527
icvscsf0.21757610735948651
icvsgm0.4176353244105624
icvswm0.3647885682299511
inumed1.5222880840301514
inurange0.6033288419246674
qi10.0
qi20.0036469537558931403
rpvecsf24.40268197674792
rpvegm13.226916491062441
rpvewm17.382658308587683
sizex224
sizey320
sizez320
snrcsf1.6515009908170681
snrgm9.56589634947167
snrtotal8.282127639837778
snrwm13.628985579224597
snrdcsf34.00757292601201
snrdgm64.48700799785166
snrdtotal60.823106167468445
snrdwm83.97473757854166
spacingx0.800000011920929
spacingy0.800000011920929
spacingz0.800000011920929
summarybgk908.2772575257163
summarybgmad7.801714573337996
summarybgmean156.22193908691406
summarybgmedian156.13389587402344
summarybgn8681277.0
summarybgp05143.06052856445314
summarybgp95169.81345214843748
summarybgstdv8.962109565734863
summarycsfk15.757684342486197
summarycsfmad86.86126974617568
summarycsfmean462.8030090332031
summarycsfmedian404.9803771972656
summarycsfn135481.0
summarycsfp05288.97589111328125
summarycsfp95929.3775634765625
summarycsfstdv245.2186737060547
summarygmk0.6256259920842129
summarygmmad72.00407346051692
summarygmmean776.5550537109375
summarygmmedian767.94580078125
summarygmn80392.0
summarygmp05658.5374053955078
summarygmp95925.2540405273437
summarygmstdv80.27904510498047
summarywmk23.571339318636635
summarywmmad47.63909320902778
summarywmmean1007.4927368164062
summarywmmedian1000.01611328125
summarywmn477906.0
summarywmp05921.1954498291016
summarywmp951105.2241821289062
summarywmstdv73.37413787841797
tpmoverlapcsf0.113265760242939
tpmoverlapgm0.3603198826313019
tpmoverlapwm0.46568331122398376
wm2max0.29662933484156684
AcquisitionMatrixPE320
AcquisitionNumber1
AcquisitionTime11:48:50.780000
BaseResolution320
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20200427
DeviceSerialNumber167017
DwellTime6.6e-06
EchoTime0.00314
FlipAngle9
ImageOrientationPatientDICOM[0.0133313, 0.989662, 0.142801, 0.00383208, 0.142762, -0.98975]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM', 'FM', 'FIL']
ImagingFrequency123.25
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressUniversity_Street_3801_Montreal_District_CA_H3A_2B4
InstitutionNameMc_Connell_Brain_Imaging_Centre
InstitutionalDepartmentNameDepartment
InversionTime0.9
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
ParallelReductionFactorInPlane2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps319
PhaseResolution1
PixelBandwidth235
ProcedureStepDescriptionFunctional_Dr.Bernhardt
ProtocolNamemprage-0.8iso
PulseSequenceDetails%SiemensSeq%_tfl
ReceiveCoilActiveElementsHC1-7
ReceiveCoilNameHeadNeck_64
ReconMatrixPE320
RefLinesPE32
RepetitionTime2.3
SAR0.0400934
ScanOptionsIR
ScanningSequenceGR_IR
SequenceName_tfl3d1_16ns
SequenceVariantSK_SP_MP
SeriesDescriptionmprage-0.8iso
SeriesNumber7
ShimSetting[317, -11621, -6473, 500, 69, -237, 0, -1]
SliceThickness0.8
SoftwareVersionssyngo_MR_E11
StationNameMRC35056
TxRefAmp212.889
md5sum93ceffd94817682ef6eac4a323efb802
softwaremriqc
version0.15.2
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.